Protein

View in Explore
Genbank accession
XLE98947.1 [GenBank]
Protein name
central tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFMSQVLIRVSRVTPDADGVKVVDAFRVESYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRVMEVSGVQVFLAYRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTLTLNVGFNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPNKYDAIDNGVITDSRPTSVVDPDSLGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSSLASASLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSPWTDYARGMSSTDVNIITDAILDEIMDSDAMKELQENAQDSAAKLNEYANSIIQNALANDGDVRIMRKENGKRKAEIKHAEVLIANETEARVQQVNQISAEFNENLNAGLTQVNEALANETEARVTSEEALSARIGQNSAALDQKLDSWADVNGVGSMYTMKLGLRYNGQEYNSGMALQLTASGGSVVSQVLFIADRFAIIRNADSGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNYIAGEQGWMIDKNGGSEFQNTTVRGTIYATDGIFKGTLQAESFIGDIAVAKRYDSMTLRRNQTVQRDGSYQNRGYVMTVVLSCTLIGETYGTGASNLGYTVDVTFNIGGQQAVRRIYIDAGNISTGTTAVELRFAADLVADNNNVSFFVRATGRDAVTDYTVTIDNITATAFRTNSNSFT
Physico‐chemical
properties
protein length:1233 AA
molecular weight: 136221,82850 Da
isoelectric point:4,75364
aromaticity:0,09489
hydropathy:-0,27486

Domains

Domains [InterPro]
DC_0014
STR
1–1233
DC_0014
IPR053171
Unmapped
3–877
IPR053171 Coil IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–714
IPR036116
XLE98947.1
1 1233
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1233
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLE98947.1
1 1233
Domain Start End Length (AA) Confidence
N-terminal 1 504 504 0,8757
Central domain 505 1052 549 0,0575
C-terminal 1053 1233 180 0,7462
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-504
Central
505-1052
C-terminal
1053-1233

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Snook
[NCBI] 		3374126 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLE98947.1 [NCBI]
Genbank nucleotide accession
PQ337356.1 [NCBI]
CDS location
range 16700 -> 20401
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCAAGCAAGCCACGTACTCCCGTAGAAATGCCAGATAACCTGATCTCAAAAGACAAGATCAAGTTGTTGCTTGCTGTTTCAGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGAACGCAAACGCAGGACTACATTCAGGGCTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTCACTCACAACACGCCTTATACGCTTACCGTATCGAACAAAAATCTTTCTGCTATTCGCTTTCGCCTGTTATGGCCGCGCGTGCTGACTCAAAAAGATAACGGCGATATGGTCGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAGATTGACGGTAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCATGTCGCAGGTGCTTATCCGCGTTAGTCGAGTAACGCCGGACGCTGACGGGGTGAAAGTTGTCGACGCTTTCCGGGTTGAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCCACCATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGCAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGTGTTTTCAAGTGGGCGTGGAGCAATAACCCGGCCTGGGTTCTTTATGATCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGTGAGTTAGGAATCCCGGTTGATAAGTGGTCGCTGTATGAGGTGGCGCAATATTGTGATGAACTTGTTCCTGACAATCGCGGCGGGATGGAACCGCGATATTTAATGGATGTAGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATATTTGTTCCGCATTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTATCGATCATCGTCGATAAGCCGCGCGATCCTGTGTACCTGTTTACGGCTGATAACGTCGTTGACGGCGTTTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTATACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATGTTGAGCCAGTGTTCAACCCGGACGCAGCCATGCGATTTGGCCACAACCCGACCAGCATTACAGCGATCGGATGCACCAGAAGGACGGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACGAACCTAAGCGCCACAACCGTTTCGTTTTCTACTGGCCTGGAAGGTATGATTCCTTCTTGCGGAGATGTTATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTATCAGGACGCGTTATGGAAGTATCTGGCGTGCAGGTGTTCCTGGCCTACCGCTGCGACGCGAAGGCTGGCGATACTCTGATCCTGAATACCGACGACGGCAAGCCTGTGCGCCGCACAATCGCCAGCGTTTCGGCGGACGGTAAAACCCTAACGCTAAACGTGGGATTTAATTTTGACGTTGCGCCTGACAGTGTATTCCTGATCGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGTAGTGATGACGACGAATTCACCTTTGCCATCACGGCTACGCAGTACGATCCGAACAAGTATGACGCGATCGACAACGGGGTAATTACCGATAGCCGACCAACTTCGGTTGTAGACCCTGATTCATTGGGCGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGAATGAGCGTAGAAACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGCAAAGATGGCGGTAACTGGAACAACGTTCCTCGCACTGCGACAACGCAGGTTGATATTGAAGGCATCTATGCTGGCGAGTATCAGGCCCGCGTTAGGTGCATTAGCGGCGGGAATGTAGCGTCTCCGTGGTCTTCTTTGGCTAGTGCATCGCTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTGTTTGCGTCGGACAATGAGATCTTTGGCATTCGCGTTAAGTGGGCTATGCCCGAAGGAGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGACGCAAGCCTGCTTACACTGATTCCTTACCCGGCGGCTGAATACTGGCATTCAATTCTGCCCGCTGGATACGTGAACTGGTATAAGGCGCGAAGTGTCGACAGGATCGGCAACGTTTCACCCTGGACTGATTACGCTCGCGGCATGTCTTCGACTGACGTTAACATCATCACAGATGCGATCCTGGATGAAATCATGGATAGCGACGCGATGAAGGAGCTACAGGAAAACGCACAGGATAGCGCGGCAAAACTCAATGAATACGCGAACAGTATCATTCAAAACGCATTAGCGAATGATGGCGATGTTAGAATAATGAGAAAGGAGAATGGAAAGAGGAAAGCTGAAATTAAACACGCAGAAGTTCTAATAGCAAATGAGACGGAAGCTAGGGTGCAGCAGGTAAACCAGATCTCGGCAGAGTTCAACGAAAACCTCAATGCTGGATTAACTCAAGTTAACGAGGCGCTGGCCAATGAAACTGAGGCACGCGTTACTTCTGAGGAGGCTCTATCAGCAAGGATTGGCCAGAACTCCGCAGCGCTAGATCAGAAGCTCGACTCATGGGCTGACGTTAATGGAGTTGGCTCCATGTATACAATGAAGCTTGGCTTGAGGTACAACGGGCAGGAGTACAATTCTGGTATGGCGCTACAGCTTACCGCGAGTGGTGGAAGCGTTGTTTCCCAGGTGCTATTTATTGCTGATAGATTCGCTATCATCCGAAATGCGGATTCTGGAGCGTACACGTTGCCGTTTGTTGTGCAGAATGACCAGGTTTTCATGAATAACGCGCTTATTCAGGACGGTTCTATTACCAACGCGAAGATCGGTAACGTCATTCAGTCCAACAACTATATCGCCGGGGAGCAAGGATGGATGATCGACAAGAATGGTGGTTCTGAGTTCCAGAACACGACTGTTCGCGGCACGATCTACGCGACTGACGGTATATTTAAGGGTACATTGCAGGCAGAATCGTTTATCGGAGATATAGCAGTGGCAAAACGCTATGACAGCATGACGCTACGACGCAACCAGACTGTGCAGCGCGATGGATCTTACCAGAATCGTGGTTATGTGATGACTGTAGTTCTATCCTGCACGCTGATTGGTGAGACATATGGAACTGGCGCTTCAAACTTGGGCTATACCGTTGATGTAACTTTCAACATTGGCGGCCAGCAGGCGGTTCGCCGCATTTATATTGATGCTGGCAACATCTCCACCGGCACTACTGCGGTAGAACTTAGATTCGCTGCTGACTTGGTTGCTGATAACAACAATGTTAGCTTCTTTGTGAGGGCCACTGGTCGAGATGCCGTCACCGATTACACTGTGACAATTGATAACATCACGGCAACTGCGTTCCGAACAAACTCAAATAGCTTTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
477301d933330dde50468ff76cf0df17b8dd630cb572792eb10edf81f36a3e61
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7740
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella phage Snook Mora,D.A., Lessor,L. and Gill,J.J. 2021-01-28 — GenBank