Protein

View in Explore
Genbank accession
WNV49606.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVVASQNAPVYPASAGAAAGMLEAKSWISGSNTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTVNTGASTINVSGFGAKAIVGAANFPLTGGELGQGLIAELVFDATGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFLQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYVPWDSGNFDPATKLTVGTTNNISGPTGIRNTTSNTGNMNTWGSSSTTASYGNAALQIFGRGSGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVVTDESNIRFHVNSMAGTPVWGGNEFWGPWNFNPNTKLTIKAGTQETSSTAIFSGTLPFAPIASLSDYSQAPLTVYNSPTGPSAKPAVIAFIRPGNWGAFFGIDTDNKLKWGGGSLGNSSREIADSSNIMNLWAANPTAPSWNGQTIWRSGNFDPATKVDLNAANATNGNMIFNRISGTGSGIASSGRVGAINLQNGAHSGQAAAVTFERGGGFFVNFGLDTDNVLKVGGGNLGANAYPVIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDYAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:964 AA
molecular weight: 103093,23050 Da
isoelectric point:5,66153
aromaticity:0,10788
hydropathy:-0,25394

Domains

Domains [InterPro]
DC_0009
ATT
1–210
DC_0009 DC_1924
cd19958
STR
152–231
cd19958
DC_1788
STR
167–700
DC_1788
WNV49606.1
1 964
Architecture
ATT
STR
RBD
ATT 1-210 | STR 211-700 | RBD 764-964
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage SAM2
[NCBI] 		3046823 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNV49606.1 [NCBI]
Genbank nucleotide accession
OQ992560.1 [NCBI]
CDS location
range 38606 -> 41500
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACCTCTTCCACTGGCTTTGCCAACCTTCGCGACGGCTACACGCCGGACTACGAAATCAGTCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGGCAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGAGTCGGCAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAACGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCTGCCTGGTCGGTGATGCGCTCCAACATACCGATGCCCGCTGGAGGGCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAATGACCTGTTGAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTCGTCGCTTCTCAGAACGCCCCCGTATATCCCGCTTCGGCTGGTGCAGCAGCTGGAATGTTGGAGGCGAAATCCTGGATATCCGGGTCCAATACATTCTGCGTTCAACGCTACACTGACCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGGGCCTGGACCAACTGGATGTACGCAGTAAACGTCATGGCCCTCCAACAAGGCCGTGTGACCTATGGGGTCGCGGCTGGCTCGGCGAACGCTTACACGTTGACGCTCGTTCCGCAGCTCCAAGGCGGCCTGGTGGACGGCATGATCCTTCGGGTCAAGTTCAACACCGTTAACACCGGCGCCTCCACCATCAACGTCTCCGGATTTGGCGCCAAGGCCATCGTCGGCGCGGCAAACTTCCCGTTGACTGGTGGAGAACTCGGTCAAGGACTCATTGCTGAGCTTGTATTCGACGCCACCGGCGACCGTTGGAGGATTCTCGCAGGCGCGCCGCGCATCCAAGTAGGCAACGCCGATCAAGATTATCAGGCTCCCAGCTGGAAACAGGTTAAGGACTATGTAGCGTCCCAAAAGTTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCCATCCAAGACACCACGCCGTGGTTCGCCAACCTGGAGCTGTCTGACGCTCGGCCTTTCATAGATTTCCACTTCAACAACAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAAGCTGATGGGTCGATGGCGTTCTATTCTCGCCAGGGGTCCGCTGGTCCTACCCAGGATATCCTGTTCAGCAGGTCGAATGTTACATTCCTCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACAACTGCCGATCAGCCCGGTTGGAAATTCACCTTCGCACAAGGTGTGGACGCCAACAACAACGCGGTTATCGCAGTCAATACCACCAACCCGGACGGCTCTTATCGCTCGCAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAATCGCCCTCTGTTTGCTGGACAATATGTTCCGTGGGACTCCGGAAACTTTGATCCGGCCACCAAGCTCACTGTCGGTACTACCAACAACATTTCGGGGCCGACCGGAATTCGCAATACCACCAGCAATACCGGAAATATGAACACCTGGGGCTCCAGCTCCACAACTGCATCGTATGGAAACGCAGCTCTTCAAATCTTCGGTAGAGGGAGTGGCGAGCCTGCGGCCATCTACTTCGACAACTCCCAAACCGGCTGGTATTTGGGCATGGATAAGGACGGCCAGCTGAAGCGAGCAGGCTGGTCGCTCGGCAATAACTCCTATGTGGTCACCGACGAGTCGAATATTCGTTTCCACGTGAATTCCATGGCTGGCACTCCGGTATGGGGCGGAAACGAATTCTGGGGGCCGTGGAACTTCAACCCGAACACCAAGTTGACCATCAAAGCCGGCACGCAGGAAACTAGCAGCACTGCGATATTCAGCGGAACCCTGCCGTTCGCCCCAATCGCGTCTCTGTCCGACTATTCCCAGGCGCCATTGACGGTTTACAACTCGCCGACTGGTCCATCTGCTAAGCCTGCCGTTATCGCGTTCATTCGCCCTGGCAACTGGGGCGCGTTCTTCGGCATCGATACCGACAACAAGCTGAAATGGGGCGGCGGATCGCTCGGCAACAGCTCCAGGGAAATCGCCGATTCCAGCAACATCATGAATCTTTGGGCGGCCAACCCGACCGCGCCGTCCTGGAACGGCCAAACCATTTGGCGATCCGGGAATTTTGATCCGGCAACGAAAGTGGATTTGAACGCCGCGAACGCCACCAACGGTAACATGATCTTCAACCGCATTTCGGGAACTGGTAGCGGGATCGCCTCGTCCGGTCGAGTTGGCGCCATCAACCTACAGAATGGAGCGCATTCGGGACAAGCGGCCGCAGTCACTTTCGAGCGCGGCGGTGGTTTCTTCGTCAACTTCGGCTTGGACACCGACAACGTCCTCAAAGTAGGCGGTGGAAACCTGGGGGCAAACGCCTATCCGGTCATCCACGCCGGGAACTACAACAACTACATCAACCAGGCGTTGGTTCAGGTCGGTCTGGGCGGCGTCGGTTCCTATGGAATCTTCGCGGTTCTGGATTATGCCGCTCCAACCGCAACCGTTCAACCCGGAGTGGTCGTGGATGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGCCAAAGACCTGCCGGGACTTGGCGCTGCATGGGATATGTAGTCAACCGGGACGCCAACACCCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a7712e1acde6788ad2c70a3cafce9c085be57adc405ec0f3ecc52387a5aa255d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6257
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Jumbo phages are active against extensively-drug-resistant eyedrop-associated Pseudomonas aeruginosa infections Cobian Guemes,A.G., Ghatbale,P., Blanc,A., Morgan,C., Garcia,A., Leonard,J., Huang,L., Kovalick,G., Proost,M., Chiu,M., Kuo,P., Oh,J., Karthikeyan,S., Knight,R., Pogliano,J., Schooley,R. and Pride,D. 2024-10-29 — GenBank