Protein

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Genbank accession
QEG04516.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPSNIVDEKDLYKPQEVKSPKAEKAEQQTESDVKYTMFVSGLNYGGRNTEMKGKNFTNDLAIIFDQVENYSFKHSVDKTGFAVEDKSTLSDHAVIKDGVFSFTGRVNTSPHIIYEQNYIDRNTDSKNPAASMRPGAALEALTEIINKRQLVSLVTEERLLENYIITSLSANKSVGEGAAMVFDVELTEFRTFYLNKVVNATVYSNPKKVGKTQQKGAVNDCKNGSNVGNKRDTGAFADTASTNAAEEWQPYKSMMWTDENGVTQSAADWYYQEYGRPSTIVPSEQGNYNKVNGK
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32763,99060 Da
isoelectric point:5,44298
aromaticity:0,09524
hydropathy:-0,68537

Domains

Domains [InterPro]
DC_0288
ATT
1–60
DC_0288 DC_1100
IPR048494
ATT
64–193
IPR048494
QEG04516.1
1 294
Architecture
ATT
STR
ATT 1-193 | STR 194-276 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage CM1
[NCBI] 		2591055 Uroviricota > Caudoviricetes > Vequintavirinae > Vequintavirus CM1 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEG04516.1 [NCBI]
Genbank nucleotide accession
MK962749.1 [NCBI]
CDS location
range 44134 -> 45018
strand -
CDS
ATGCCAAGCAATATAGTTGATGAAAAAGACCTGTACAAGCCTCAAGAGGTTAAATCTCCAAAGGCTGAAAAGGCAGAACAGCAAACTGAAAGCGATGTAAAGTACACTATGTTTGTCAGCGGTCTTAACTATGGTGGTCGCAATACGGAGATGAAGGGTAAAAACTTTACTAACGATCTTGCCATCATCTTCGATCAGGTTGAGAATTACTCTTTCAAACATTCTGTTGATAAGACTGGGTTTGCGGTGGAAGATAAATCTACCCTGTCAGACCACGCTGTAATTAAAGATGGTGTATTTTCTTTTACTGGTAGGGTAAATACATCACCACATATAATCTATGAGCAAAACTACATTGACAGGAATACTGACTCTAAAAACCCTGCAGCGTCTATGCGACCAGGCGCTGCACTGGAGGCTTTGACTGAGATCATTAATAAGCGCCAGTTGGTTTCTTTGGTTACCGAGGAGAGACTCCTTGAGAACTACATCATAACCAGCCTTTCTGCCAACAAGTCTGTTGGTGAAGGTGCTGCGATGGTGTTTGATGTAGAACTTACAGAGTTCCGCACATTCTACTTGAACAAGGTTGTTAATGCAACTGTATACAGCAACCCTAAGAAAGTAGGCAAGACCCAGCAAAAAGGTGCTGTCAACGACTGTAAGAATGGCAGTAACGTAGGTAACAAGAGGGACACAGGGGCATTTGCAGACACTGCATCCACAAATGCCGCAGAAGAGTGGCAGCCCTACAAATCTATGATGTGGACGGATGAAAACGGTGTTACTCAATCTGCTGCGGATTGGTATTATCAGGAATATGGAAGACCTTCTACCATAGTCCCATCTGAGCAGGGAAACTACAACAAAGTTAACGGAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a7ae96b9cc6dc610fa94d5fd68c0e93d15f16d2f4337feccefa54751bdaf2ed3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A quest of great importance - developing a broad spectrum Shigella ssp. and Escherichia coli phage collection Kaczorowska,J., Casey,E., Neve,H., Noben,J.-P., Lugli,G.A., Ventura,M., van Sinderen,D. and Mahony,J. 2019-09-26 — GenBank