Protein

View in Explore
Genbank accession
YP_011992186.1 [GenBank]
Protein name
lateral tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIRTKIIVQQILNIDDTTTTASKYPKYTVVLGNSISSITAGELTAAVESSAASAAAAKDSEIAAKSSETNARDSENRAAIYADSSEASATQSATSATESERQAELSKASAEESAASATEAGTHKDAAQLAAQNAERSRELAEQAKTAAQQAQVAAETAKTGAETAKEGADAAATTAGEHAAAAKQSELNAKVSETNAAGSATEAGDKAIDATAEADRAKAEADRASQVVDGKLDKVDISGFIKVYKTKAEADADVANRVLDEKILVWNQTESKYGWYKVAGTTKAPVLELVETEQKLVSINNVHADDAGNVQITLPGGNPSLWLGEVTWFPYDKDSGVGYPGVLPADGREVLRVDYPDTWEAIEAGLIPSVTETEWQAGAILYFSTGDGSTTFRLPDMMQGQAFRAPTKGEEDAGVIKDQIPYVVTVNGISPDDITGNVEIDTSLQGTVNINQGGTGATTKEDARIALELYSTTEVDSALADKADIATTYTKMEVDSALADKADIATTYTKMEVDSALADAKTQSDTNYLLKANNLSDLGDRTAAWLNVRPLGSTPLASDPVSDYDATTKRWVQNLIGAGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVLSDGQLLNRAAWPELWAYAQMLSPISDAEWLSSAEKRGRYSTGDGSTTFRVPDRNGVQPGSTTSLFGRGDGGTSSENGRVYEAAAPNILGTFANDTSGKVWMPAPKSVTGSFGYAPTTEMTFLPNDGSFVKVNNNATTTFNARLSDEVYGKYEVKNQILPKSFVGVWVIRASGGFTAANTSWSVINADAVVPGANVTTYGGDMWSTYQVAGADYVKLGYRAKVTIDGASTGEIRLMDSRVGGTSKTWEMPTVSGTLLSSADIGTSGAKIPLLNVQNMWTKTQVFQESGVVTQSVLPSDATLNDHGGPHFVSYVITDNQIRLGAKFFSSFDSTNLRRAVVQVTTDNDASAQIFAFDQRGDISSAKGIVQWSGSDTRIKTNFEPVQSGSWERISKISICEYTYKVNPTPQRGYLAQQMREIDPLYVFEGGRSIDDNGKEFEILNVNDKAVTADLIIVVQQMQEKLAVLEEHNKKIIPLEEEIATLKDEVNTLKKLLVEINQSLAITSRVSALESEVNELKRP
Physico‐chemical
properties
protein length:1132 AA
molecular weight: 121007,61580 Da
isoelectric point:4,69151
aromaticity:0,06890
hydropathy:-0,34302

Domains

Domains [InterPro]
DC_0608
ATT
2–475
DC_0608 DC_1514 DC_1985
Coil
Unmapped
125–155
Coil Coil IPR030392 Coil
IPR030392
CHP
984–1082
IPR030392
YP_011992186.1
1 1132
Architecture
ATT
STR
RBD
ATT 2-475 | STR 538-687 | RBD 763-1116 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage TrudiGerster
[NCBI] 		2851991 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus trudigerster
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011992186.1 [NCBI]
Genbank nucleotide accession
NC_105114.1 [NCBI]
CDS location
range 20887 -> 24285
strand +
CDS
ATGGCGATCAGAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAGTATCCTAAGTATACAGTAGTTTTAGGTAACTCTATTAGTTCTATTACTGCTGGTGAGCTGACTGCAGCTGTGGAATCATCCGCAGCTTCAGCTGCTGCTGCTAAAGATTCTGAAATTGCAGCAAAATCATCCGAAACTAATGCTAGAGACTCAGAAAATAGAGCCGCTATCTATGCTGATTCTTCTGAAGCTTCTGCTACTCAATCAGCTACTTCTGCTACAGAATCTGAGAGACAGGCTGAATTATCTAAGGCTAGCGCTGAAGAATCCGCTGCATCTGCTACAGAAGCTGGTACACACAAAGATGCGGCTCAGTTAGCTGCTCAAAATGCTGAGAGAAGTAGAGAACTAGCCGAACAAGCTAAAACTGCTGCTCAACAAGCCCAGGTAGCCGCGGAGACTGCTAAGACGGGAGCTGAAACAGCTAAAGAAGGAGCAGATGCTGCTGCGACAACGGCTGGAGAACATGCTGCTGCTGCTAAACAATCAGAACTAAATGCTAAAGTTTCCGAAACTAATGCTGCTGGTTCTGCTACCGAAGCTGGTGATAAAGCTATCGATGCTACTGCTGAGGCAGACCGTGCTAAAGCAGAAGCCGATCGTGCATCCCAGGTTGTTGATGGTAAACTTGATAAAGTAGACATCTCTGGTTTTATCAAAGTTTATAAGACAAAAGCAGAAGCTGATGCGGATGTTGCAAACCGTGTTCTAGATGAAAAGATCTTAGTTTGGAATCAAACTGAGTCAAAATATGGTTGGTATAAAGTTGCAGGTACTACTAAAGCTCCTGTCCTAGAGTTAGTAGAAACTGAACAGAAACTTGTATCAATCAATAACGTTCACGCTGATGATGCTGGTAACGTACAGATTACACTTCCAGGCGGTAACCCTTCTCTATGGTTAGGTGAAGTTACTTGGTTCCCTTATGATAAAGATTCTGGTGTTGGCTACCCTGGTGTTCTGCCTGCTGATGGACGTGAAGTACTTCGCGTAGACTATCCAGATACTTGGGAAGCTATCGAAGCTGGTCTGATCCCCTCTGTTACTGAGACTGAATGGCAGGCGGGTGCAATTCTTTACTTCTCCACTGGTGATGGTTCTACAACGTTCCGTTTACCAGATATGATGCAAGGGCAAGCCTTCCGTGCACCAACTAAAGGCGAAGAAGATGCTGGCGTTATTAAAGATCAGATTCCTTATGTTGTGACAGTTAATGGTATCTCTCCAGATGATATAACTGGTAACGTTGAAATTGATACCTCACTACAAGGTACTGTTAATATTAATCAAGGAGGTACTGGTGCAACAACTAAAGAAGACGCCCGTATAGCCCTCGAGCTATATAGTACTACGGAAGTTGATTCTGCTTTAGCAGATAAGGCCGATATTGCTACCACGTATACTAAGATGGAAGTTGATTCTGCTTTAGCAGATAAGGCCGATATTGCTACCACGTATACTAAGATGGAAGTTGATTCTGCTTTAGCAGACGCTAAAACTCAGTCAGATACTAACTACTTATTAAAAGCAAATAACTTGAGTGATCTCGGAGACCGTACTGCTGCATGGCTTAACGTGCGACCACTTGGCTCTACTCCACTGGCGTCAGACCCTGTAAGTGACTATGACGCCACAACTAAGCGCTGGGTGCAGAACTTAATCGGCGCAGGGACTGTAGGCCCGACAATGAACGGGGTCATGAATTATGGTGTTGGGGATTTCCACCTACGGGATAGCAGGGCGTATATTCAACCTTATGAGGTATTATCAGACGGTCAATTGCTTAATCGTGCAGCATGGCCTGAATTGTGGGCATATGCTCAGATGCTATCCCCTATCAGTGATGCTGAGTGGCTTAGTTCTGCGGAAAAACGTGGGCGTTATTCCACCGGTGATGGGTCAACAACCTTCCGTGTTCCAGACCGAAACGGTGTGCAGCCTGGGTCAACGACTAGTCTTTTTGGACGAGGGGATGGTGGTACTTCATCAGAGAACGGTAGGGTTTATGAAGCTGCTGCACCTAATATATTGGGGACATTTGCAAATGATACCAGCGGAAAGGTGTGGATGCCTGCTCCAAAATCAGTAACGGGATCTTTTGGTTATGCCCCAACAACAGAAATGACATTTTTACCTAATGATGGTTCCTTTGTAAAAGTCAATAACAATGCTACTACGACCTTTAATGCGAGATTGAGCGACGAGGTATATGGTAAATACGAAGTTAAAAATCAGATACTGCCCAAAAGTTTTGTAGGTGTTTGGGTTATTCGCGCATCCGGAGGTTTTACTGCTGCAAATACGTCATGGTCTGTGATCAATGCGGATGCTGTGGTTCCTGGAGCTAATGTTACTACTTATGGTGGTGATATGTGGTCAACATACCAAGTGGCTGGTGCTGATTATGTCAAATTAGGCTATCGTGCGAAAGTCACTATTGATGGTGCGTCTACAGGAGAAATCCGTCTAATGGATAGCAGGGTAGGGGGTACTAGCAAAACCTGGGAAATGCCTACTGTCAGTGGTACGCTTCTTAGTAGTGCGGATATAGGAACTTCAGGAGCTAAAATCCCTTTACTTAACGTTCAGAACATGTGGACAAAAACTCAGGTTTTCCAAGAATCAGGTGTTGTCACTCAATCGGTGCTGCCATCGGATGCTACTTTAAATGATCACGGCGGTCCTCATTTTGTTTCATATGTTATAACTGATAATCAAATTCGTTTAGGCGCTAAATTCTTTTCTAGTTTTGATTCTACGAATTTAAGAAGAGCCGTTGTCCAAGTCACAACAGATAACGATGCTTCCGCCCAGATATTTGCATTTGATCAGAGAGGGGATATTTCATCTGCGAAAGGTATTGTACAGTGGAGTGGCTCTGATACCCGTATTAAGACTAACTTTGAACCTGTGCAAAGTGGGTCGTGGGAGCGTATTTCTAAGATTAGTATCTGTGAATATACCTATAAGGTAAACCCTACTCCTCAGCGTGGGTATCTCGCTCAGCAAATGAGGGAAATAGACCCGTTATATGTCTTTGAAGGGGGTAGGTCTATTGATGATAACGGCAAAGAGTTTGAAATACTAAACGTGAACGATAAAGCTGTTACAGCAGATTTAATCATAGTTGTGCAGCAAATGCAGGAAAAACTAGCTGTGCTTGAAGAGCATAATAAAAAGATTATCCCCTTAGAGGAAGAAATAGCTACTTTAAAAGATGAAGTTAATACTCTTAAAAAGTTACTTGTAGAGATTAATCAATCATTAGCTATCACTAGTCGTGTCTCAGCTTTAGAGTCCGAAGTTAATGAATTAAAACGTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9702bff4f6217d12c8c35a40490f1e3b5edfd44a80c509153bb2e68ba6f9e880
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank