Protein

View in Explore
Genbank accession
YP_009881195.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MAIPSFLNFLEESKQLDEAFNSSPYELTFGKKNAGDIFFTFVDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGVTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMKGVTWDDPDKVGDVPVQNSVDGVVGGTGQTIVVGVDFRSEMEDLVISVSGNEVSVMDGRKLVVSFTDPETARIISGMKSPSAAITNFMQKTNPGRYTGNIKVNSTSTRSGKKYEFIASDSSGKQLFNLNVEDSRETNLTPADSNTTIGVTSIDQLRDSGFVARVLGIIDTNIDQKASYLPGESIKRIGQARYQTKGGLVIIVSFDSVDGKNLKYSVFSEIETQPGVISGDARRVANEIMETITYVAEHQYRGEWEINAVPMSAPYPIKSIRHSQGWGYVETANWTLKIADAVLNRVKPGNTALLELNKEPLRGKHLLEIIPEKGDKTLMLKDRSGAIYGSIDLNAQGADLVNSGTLKMPSNAMVFGETVNGMSVTWTGVNFPKGGKYDGAVLTTNVTYYYDKGKVAFTPMVSNKGRTLNNPKTYELPLKKEFVQGVLDDTSDEMSMVTRNMQTLVSTNYNPKQVFLNDIYVDDSGAVLWRGHNMGDRRTTEIMLNTISKETERLEKEPGTTKKTGVDLATYAGSIRDNAPKGRDLDWQIYASRDGQTLNVDWDITFRRNTTEGAYREFKDQINRANQYLQTVYNDAKSKGYNPTEPNLMTLERARQSDEWAMSNGDSAYSEYEQSLGGNLQISLK
Physico‐chemical
properties
protein length:810 AA
molecular weight: 89995,60240 Da
isoelectric point:6,97388
aromaticity:0,08642
hydropathy:-0,47679

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009881195.1
1 810
Domain Start End Length (AA) Confidence
N-terminal 1 478 478 0,8255
Central domain 479 772 295 0,7816
C-terminal 773 810 37 0,6743
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-478
Central
479-772
C-terminal
773-810

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SenASZ3
[NCBI] 		2301648 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009881195.1 [NCBI]
Genbank nucleotide accession
NC_049439 [NCBI]
CDS location
range 138289 -> 140721
strand -
CDS
ATGGCCATCCCATCTTTCTTGAACTTTCTTGAAGAGTCTAAACAATTAGACGAAGCGTTTAACTCATCCCCGTATGAATTGACATTCGGCAAGAAGAACGCTGGCGACATTTTCTTCACATTTGTTGATGAAGACGAAAAAGAATTCCGTATTCAATTCTATACCCCACAAGGTCTAGGCAAGAATGTTCGCCAAGTCTTTATCGGTCAGAAGCGTGGTTCCACATATCCCGATGCCATCGGTCGTTTCAAGAATCCGATGCGTGTTATCGCATCCATGATTGAAGCAACAAAGCAATTCATGGCGACGCCTTTGGGGAAAACCATTGACGGCTTTGCAATTAACTTCTCCAAGAAAGCATTGGAGCGTGGTGTTACCCTCCTGCCGAAGATTATCCGTCAGTCCGGCCTGAAGCAAAAGCTCAATGTCATGGACCTGACGTATACCCCTATCCCTGATCGTGCATTCGTATGGGTTGTGCGTAAAGGCAAGGATCCTGCTCAGGTATTCGATGGTCCGAAAATGAAAGGTGTCACATGGGATGATCCAGACAAGGTCGGCGACGTTCCGGTTCAGAACAGCGTTGATGGCGTTGTGGGTGGAACTGGTCAAACCATTGTTGTTGGTGTTGATTTCCGTTCTGAAATGGAAGACTTGGTTATTTCAGTTTCTGGAAATGAAGTATCGGTAATGGATGGGCGTAAATTGGTGGTGTCTTTCACCGATCCGGAGACAGCTAGAATCATTTCTGGGATGAAAAGCCCTTCTGCTGCAATTACCAATTTCATGCAAAAAACGAATCCAGGAAGATACACTGGAAACATCAAAGTTAACAGCACGAGTACCCGCAGTGGCAAGAAATATGAATTTATTGCTTCCGACTCATCTGGGAAACAATTGTTCAATCTAAACGTAGAAGATTCTAGAGAAACAAACTTGACACCCGCCGACTCCAACACTACAATCGGTGTAACCAGTATCGACCAATTGCGCGACAGCGGTTTCGTCGCCCGTGTGTTGGGTATCATTGATACCAACATTGATCAGAAAGCAAGCTACCTCCCAGGAGAAAGCATTAAGAGGATCGGACAGGCGCGTTATCAAACCAAAGGCGGTCTGGTGATCATTGTCAGCTTCGATTCGGTCGACGGTAAGAATCTGAAGTACAGCGTGTTCTCTGAAATCGAAACTCAGCCTGGTGTCATCTCTGGTGATGCCCGTCGGGTGGCAAACGAAATCATGGAAACGATCACATACGTGGCTGAACATCAGTATCGCGGTGAATGGGAAATCAACGCAGTACCAATGAGCGCTCCATATCCTATCAAGTCCATCCGTCATTCTCAGGGATGGGGCTATGTAGAGACCGCAAACTGGACTCTGAAAATAGCCGATGCGGTTCTGAATCGCGTGAAACCAGGGAACACCGCTCTGTTGGAACTCAACAAAGAGCCTCTGCGCGGCAAGCACCTGCTGGAAATCATTCCAGAGAAGGGCGACAAGACTCTGATGCTAAAAGATCGCAGCGGAGCCATCTATGGTTCCATTGATCTGAATGCTCAGGGTGCGGATCTGGTCAACTCTGGAACCCTGAAAATGCCGAGCAACGCCATGGTATTTGGTGAGACTGTTAACGGTATGTCTGTCACATGGACTGGCGTCAATTTCCCGAAAGGCGGGAAGTATGACGGCGCGGTGTTGACAACTAATGTGACCTATTACTACGACAAAGGTAAAGTAGCATTCACTCCGATGGTCTCTAACAAAGGTCGCACCCTGAACAATCCGAAAACATATGAACTTCCTTTGAAGAAAGAATTTGTTCAAGGTGTTCTTGATGATACCTCTGACGAGATGAGTATGGTGACGAGGAACATGCAGACCCTCGTCAGCACGAATTACAACCCGAAACAAGTCTTCCTCAATGATATCTACGTGGACGACAGCGGCGCGGTGCTCTGGCGCGGCCACAACATGGGTGATCGCCGTACGACAGAGATCATGCTGAACACCATCAGCAAAGAAACCGAACGTCTGGAAAAAGAACCAGGGACTACCAAGAAGACGGGTGTCGACCTCGCAACATATGCTGGTTCTATCCGCGACAATGCTCCGAAAGGGCGCGACCTGGATTGGCAGATCTATGCAAGCCGTGATGGTCAAACACTGAACGTGGACTGGGATATCACTTTCCGTCGCAATACGACCGAAGGAGCATATCGTGAATTCAAGGATCAGATCAACCGTGCCAACCAATACCTGCAAACGGTATACAACGACGCGAAATCTAAAGGCTATAATCCTACCGAGCCAAATCTCATGACTCTTGAACGCGCTCGCCAATCCGACGAATGGGCTATGAGTAATGGTGATAGTGCATACAGTGAATATGAACAATCGCTGGGTGGTAATCTTCAGATTAGTCTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
297a61d083eb641a0f1e50e850dc6e1b63adc1ea57113d62625afa9e4a29654a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genomic analysis of two Salmonella enterica phages SenALZ1 and SenASZ3, new members of the Cba120virus genus (SenASZ3) Chen,L. 2019-03-08 — GenBank