Protein

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UniProt accession
A0A0H4IPM2 [UniProt]
Protein name
Tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVSLKLARRRTSGGASYALNPGVDIDSTLMVVDFPTKPLNFKVTGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLADAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNGEKGTQAQTQIGVKAIIDQIRDEAAKSPVVSELRKEIKNAQGQAVKDAAIKTTEVVGTLREETTRTIGGIETRISTLDSSTSESLNEVDKRITKLDKEGGEAFLAMWSKKAGVDGITAGIGIVAGKDGEGRPVSQVAISASQLFVFDPNNPDNTAYPFAVSGGKVVIPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDQNGRLAVRIGRLR
Physico‐chemical
properties
protein length:422 AA
molecular weight: 45421,86170 Da
isoelectric point:7,76815
aromaticity:0,06398
hydropathy:-0,22986

Domains

Domains [InterPro]
DC_1230
STR
42–422
DC_1230
IPR015406
RBD
256–333
IPR015406
A0A0H4IPM2
1 422
Architecture
STR
STR 42-422
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Ss-VASD
[NCBI] 		1675531 Uroviricota > Caudoviricetes > Sepvirinae > Oslovirus VASD >
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKO62166.1 [NCBI]
Genbank nucleotide accession
KR781488 [NCBI]
CDS location
range 47308 -> 48576
strand +
CDS
ATGACAAAAAAACCGTGGCGCGCAGGAAAAGATTTATCTGCGGTTGTGGAGAATATGGAGATTGGGACAGGACAGCGTGGCGACGGTCGTCATGCTTTTGTAACCCGTGAAGAACTGGTCAGTCTGAAGCTGGCCCGTCGTCGGACTTCAGGTGGTGCCTCATATGCACTGAATCCGGGTGTTGATATTGACAGTACCTTAATGGTTGTTGATTTTCCCACAAAACCGCTGAATTTTAAGGTGACTGGAGGATTTGGCTCAGTTCTTCTGGAATGGGATATGCCAAATTATCGGGGACACTCACTGACTGAAATCTGGCGGGGTACGGAAGATGACCTTGCGGATGCGGTACTGGTTGCCACGACGCCGGGGCAGGTTTACGGCGATCCGGTTGACCCTGGCTGGTCGGGATTTTACTGGATACGTTTTGTTAACGCGGCAGGAGTGAAAGGTCCATGGAATGGTGAAAAAGGCACACAGGCACAAACACAGATCGGTGTGAAGGCCATCATTGACCAGATCCGCGATGAGGCTGCAAAGTCGCCGGTTGTGTCCGAGTTGCGTAAAGAAATAAAAAACGCGCAGGGGCAGGCTGTAAAGGATGCTGCAATTAAGACAACCGAAGTTGTAGGGACTCTCAGGGAAGAAACGACAAGAACGATTGGTGGTATTGAAACCCGCATTAGCACACTGGATTCGTCAACCAGTGAATCGCTTAATGAGGTCGACAAGCGTATCACTAAACTGGATAAAGAAGGCGGTGAAGCTTTTCTTGCGATGTGGTCAAAAAAAGCGGGGGTTGATGGTATCACTGCGGGGATCGGGATTGTCGCCGGAAAAGACGGTGAAGGCAGGCCTGTAAGTCAGGTTGCAATTTCTGCGTCGCAGTTGTTTGTCTTTGACCCGAATAATCCGGATAACACAGCCTATCCGTTTGCGGTATCAGGTGGCAAGGTAGTGATCCCGAAAGCGATGATTTATGACGCGGTGATTGAAACACTGGTGTCGCGGAAGGTTGTGGCGGATGAGGTAAAAGCCGGGGTAAGTATCACTTCGCCAGTTATCCGGAGTGCCGTTATTCAGAACGGAAACTTTCAGGTTGATTCTCAGGGTAACCTGAATATTGGAGGCCTTTTCAGTGTTACGTCACAAGGGCAACTGACAATTCGTTACTCTAATCAGAATGTAGGACTGGTGATCCGCAATGATAAAATTGAGGTTTATGATCAGAATGGACGACTGGCTGTTCGCATAGGCAGATTACGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c3f086a11742cd584c80e4f8e1d3ad808c637fd298b78602a651b7df54361259
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50