Protein

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Genbank accession
GENB_af5573150f4e [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAEPILMAAFGEDFVETRILSEANSVKYWLKAYATHSNAVPNKPELNINGAFDMTSSLRRGINVVQVNGDRFINFKTFDVTTDDNNANNKAFVEYANGLTSGLYIIMTHERFQSSPLIDRWFKNKWSASWPGSDFSKSFPNSAYVGVLGAAKGRILIESFYGNDGVVKEDSRAKVDTVYDNVGDVGYTGCPYRSIEDTNEYSDSTGYEYKRYPVQNESISKIADYGLSPGDSVFLVCDMYASKSLLDAGSTTRASLRWFKGSSLLSSNVSLEVPKNGADRWLRFERFTAVPTDADGFTIVVSRYPKTSVVGDSKIKNLVFVQTSHGEQLNSVIQEFGVNGIRMNKGVEGGTTVIMELPNSKVDPSGVIPVQSFRETSD
Physico‐chemical
properties
protein length:378 AA
molecular weight: 41758,15590 Da
isoelectric point:5,34692
aromaticity:0,11111
hydropathy:-0,32831

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_af5573150f4e
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,3917
Central domain 144 367 225 0,4147
C-terminal 368 378 10 0,2395
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-367
C-terminal
368-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_W15-2
[NCBI] 		3120105 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PP312928.1_CDS_[131061..132197] [NCBI]
Genbank nucleotide accession
PP312928.1 [NCBI]
CDS location
range 131061 -> 132197
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
5afd7ba0487a9f356874a15f77dc038ca7746b13d3071195dfa193dffdeed851

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6769
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50