Protein

View in Explore
Genbank accession
ATS92183.1 [GenBank]
Protein name
putative tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MPFLAPVFTAVGAAISSVAAWAAASPILAGIVQTAFGIAAKYALGAMLREKPKPTAAKLETEYGADLVRSVGLGYYATAGHHIFRNASGKGNRLVRDVYVVSHFRITDVPRIKFEGEWVTLASLPTHPQFGKEINSNTFAKVYFGTMTQTADADLIARSNPAGRWTADHRGAGVAYVIITSNLNREFTSPFKPLFEVKGAPLYDWRKDTTVGGSGSHRWNDQNTWEFSENPIVQMYNLERGIFNGTQKMVGKGVSASRLPLSQWSLAANIADEIVDGIPRYRSSLIATSGANVTHNTNMEPLLEACAGSWVERVDGEYPIAGAERAVSFTITDDALVREASHRVSLKSPRVELINTVASQFPSPESFYEMVPGANRVDTVALAEDGEILASSIPYDAVIYSKQVDRLADIAIRAARYQGNAEITIRPEYLDYVKPGQWMRWNSAKYGDITWQILTVSLGPLRQGGARNITMALKEIAPGVFDPTAYTNDPPGPPVTGVPDYLAELQGFVATPNLVQGSTGTTLPGVRLSWTAIDDVTVTSVQIEYNPIAQPTVIFKKIVSADVSSVQIVEGLTSSTDWRVRTILITDPARPVAYSAYTNFTTMQGSIADLYPIDVDKLADDLKGYMDWTAGGLREVKRQLEEIALHINDLDYGNFTDRQEIRRTLSSETGRLTADYDEKILVATGPNSAIAERLTTLNVRLIDAQDDIIAQASATELLTTRVTIAEGEIDVNTAAITSLTATVNTKADASAVTALTARVTTAEGDIDANSSAITSLTATVNGKADASAVTSLTARVSTVEGQVTSQAEAITALQSDYNGVSANATFRMATAAAPSGWTARIAMQARVNSGSTFRTAGIYLDSTTTLARVAIVADQFVISSGTDTAAPFIFSGGEAIMNLARIGTIRAGRLLSLNNKMDINLTNGTIEIYS
Physico‐chemical
properties
protein length:930 AA
molecular weight: 99997,48360 Da
isoelectric point:5,23865
aromaticity:0,07742
hydropathy:-0,05602

Domains

Domains [InterPro]
DC_1879
ATT
2–299
DC_1879 DC_0338
DC_0338
STR
741–928
DC_0338
G3DSA:1.20.5.340
STR
747–825
G3DSA:1.20.5.340
ATS92183.1
1 930
Architecture
ATT
STR
ATT 2-299 | STR 437-928 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage HMSP1-Susan
[NCBI] 		2049306 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sinorhizobium meliloti
[NCBI] 		382 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS92183.1 [NCBI]
Genbank nucleotide accession
MG214783 [NCBI]
CDS location
range 21347 -> 24139
strand +
CDS
ATGCCGTTTCTCGCTCCCGTCTTTACCGCCGTTGGTGCCGCAATTTCCAGCGTTGCGGCATGGGCGGCGGCATCCCCCATTCTTGCCGGTATCGTCCAAACCGCGTTCGGGATCGCTGCAAAGTACGCGCTTGGCGCGATGCTCCGCGAGAAACCGAAACCAACCGCTGCGAAGCTTGAAACGGAGTACGGCGCCGACTTGGTGCGCTCCGTTGGTCTCGGTTATTACGCGACTGCCGGTCACCATATCTTCCGCAACGCATCCGGTAAGGGTAACCGTTTGGTGCGCGATGTTTATGTGGTTTCACACTTCCGGATTACCGATGTTCCCCGGATCAAGTTTGAAGGCGAATGGGTAACCCTAGCGTCACTCCCGACGCATCCGCAATTCGGTAAAGAGATAAATTCAAACACCTTTGCCAAAGTTTATTTTGGCACGATGACGCAAACCGCTGACGCGGATTTGATCGCGCGGAGCAACCCGGCGGGACGGTGGACGGCGGACCATCGCGGCGCGGGCGTGGCCTATGTGATCATCACGAGCAACCTTAACCGGGAGTTTACCAGTCCGTTCAAGCCGTTGTTTGAAGTCAAGGGCGCCCCGCTTTATGACTGGCGAAAAGATACCACCGTTGGCGGCTCAGGTTCGCACCGTTGGAACGATCAAAATACATGGGAATTTTCGGAAAACCCCATCGTACAGATGTACAACCTTGAGCGCGGTATTTTCAACGGCACTCAAAAGATGGTCGGTAAGGGCGTATCGGCATCTAGATTACCGCTATCGCAATGGTCGCTTGCGGCAAACATTGCCGACGAAATTGTTGATGGGATACCTCGTTACAGATCGTCACTAATCGCCACGAGCGGCGCCAACGTCACTCACAATACGAACATGGAACCGTTGCTTGAAGCGTGCGCGGGTTCATGGGTGGAACGTGTTGACGGGGAGTACCCTATTGCCGGTGCTGAGCGCGCCGTGTCGTTTACGATCACAGATGACGCGCTAGTGCGGGAAGCTTCGCACCGGGTATCGTTGAAGTCTCCCCGCGTAGAGTTGATCAACACCGTTGCTTCACAGTTTCCGTCACCTGAATCGTTCTATGAAATGGTGCCGGGTGCGAACCGTGTTGACACGGTGGCGCTGGCGGAAGACGGGGAAATTCTAGCGTCGTCTATCCCTTACGATGCGGTCATTTATTCGAAACAGGTTGACCGGCTGGCGGATATCGCGATACGCGCGGCGCGCTATCAGGGTAACGCGGAAATCACCATCCGTCCCGAATATCTCGATTATGTGAAGCCGGGGCAATGGATGCGGTGGAACTCCGCTAAGTACGGCGATATCACGTGGCAGATTTTGACCGTCTCGCTTGGTCCGCTGCGGCAGGGTGGCGCCCGTAATATCACAATGGCGCTTAAGGAAATTGCGCCGGGGGTGTTCGATCCTACCGCTTACACGAATGACCCGCCCGGTCCGCCGGTCACAGGTGTTCCGGACTATCTCGCGGAACTGCAGGGGTTCGTAGCAACGCCTAACCTCGTGCAAGGATCGACCGGCACCACGTTGCCGGGTGTGCGGCTATCGTGGACGGCGATTGACGACGTTACAGTGACGAGCGTGCAGATTGAATATAATCCAATCGCTCAGCCAACTGTGATATTCAAGAAAATCGTTAGCGCCGACGTTTCGAGCGTGCAGATTGTCGAAGGTCTCACTTCCTCGACTGATTGGCGCGTCCGTACTATCCTGATCACCGATCCGGCGCGCCCGGTCGCGTACAGCGCTTATACCAACTTCACGACCATGCAAGGTTCCATAGCGGACCTGTACCCTATCGACGTTGACAAGCTTGCTGACGATCTAAAGGGTTACATGGATTGGACCGCTGGCGGCTTGCGGGAAGTCAAGCGCCAGCTTGAAGAAATTGCGCTCCATATCAATGACCTTGATTATGGGAATTTCACGGACCGGCAGGAAATCCGGCGCACTTTGTCATCCGAAACCGGGCGGCTAACGGCGGACTATGACGAGAAAATTCTAGTTGCCACGGGTCCGAATAGTGCCATCGCTGAGCGCCTGACAACGCTGAACGTTCGGTTAATCGACGCTCAAGATGACATCATAGCTCAGGCGTCCGCAACGGAATTGTTAACTACCCGTGTGACGATTGCAGAAGGGGAAATTGACGTTAACACAGCGGCAATCACGTCCTTGACCGCGACCGTTAACACTAAAGCCGATGCATCCGCTGTTACAGCGTTGACCGCTCGCGTAACGACTGCGGAAGGTGACATTGACGCTAATTCGTCGGCTATCACGTCCTTGACCGCAACCGTGAACGGTAAAGCTGATGCATCGGCGGTTACATCGTTGACCGCTCGCGTGTCTACGGTGGAAGGTCAAGTAACTTCACAGGCGGAAGCTATTACCGCGCTGCAGTCGGATTATAACGGTGTATCTGCAAACGCCACGTTCCGGATGGCTACCGCTGCAGCGCCTTCCGGGTGGACCGCTCGAATTGCGATGCAAGCGCGCGTGAACAGCGGCAGCACATTCCGGACCGCTGGAATTTATCTCGACTCGACAACGACGCTCGCCCGTGTGGCCATCGTGGCAGATCAGTTTGTAATTTCTAGCGGGACGGACACAGCGGCGCCGTTCATTTTCTCCGGTGGAGAAGCGATCATGAATCTTGCGCGTATCGGTACAATCCGCGCGGGGCGCCTATTGTCGTTGAACAACAAAATGGATATCAACCTGACGAACGGCACGATTGAAATTTACAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee7ccc5c7e9e152092ff49a49c29e80b79e65bbb14ea205db95028b75d22caaa
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Nucleotide Sequence of Sinorhizobium Bacteriophage HMSP1-Susan Martinez-Vaz,B.M., Fleagle,B., Imamovic,A., Toledo,S., Couves,M., Jensen,A., Vang,M., Ashley,S., Young,N.D. and Sadowsky,M.J. 2018-05-03 — GenBank