Protein

View in Explore
Genbank accession
QDH46642.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MGRKKSQTVGYRYFVGVHFVLCHGPIDRILQIKVDDKVLWTPLHDQQGVGQIGGYETITVDAPGLFGGEDREGGVSGELDVGFGDRTQGKNGYLQQVLQGKLLPAYRGVVSVILRKMYVGTNPYLKPWKFRVQRIWAPTATNKPQWSPPNAGIGLPGDQYVLRDVFGPDYGLFGSASTMFDGRLYTVRNKRVNAEDTGAAIGANTPSGITLVVHDYNTGKVTIVDDVPRKAPYVGFHIRPMTDDVITIDGGRKLLYPLCVDRTNSQFKYHYAAIFDVVDRTVTRIQYPASPLMANNRNFVYPSGLSAAQRSYLGVRFAAAWDDDIDGHYIVLGPQGSSYKLIPLRGEVVQLYNDSLVPVNGYRLGYQKAPQRRLFVFWYTRFDIQGVWRDQLNAAIHDTETGMVIWESGPTLIPGGAFKFDNFTRVSNLADISIMCAPDGFVYVFLSRTMAAYFGKRVLVYNTISPPGSSPELTDMGLPWYKYTGIDGYTVETSWYQGHACGTFKQPRTGLDGQLYGFSAFSTEPGFILNPGMGPGLSRGSVSLMPWNGNGSVDLSHGATVDSAVFVWHGLPVAITPRWIGSTAEFETLTPLVSPDNGVATTISPGPWDMNPIHIIRECMTNTEWGRGLPDSIIGPSYAKAAQTIYKEGLGLSMLWTSEMAVNDFILEVIRHIDAVRYEDPETGLQEIKLIRPDYDVATLPVLSPSNCRIEQLTAPTLYDLVNQITIEFWNRDTGEDSALAIQDTAAINMSGTVNNQTMQYAGICSERVALLVGQRDLARYSKPFRQGRLIVNRKVANIKPGDPFILNWPARGVTQMVCRAAKRSDNGELDGMIGIEFGEDIFSAPYNVANVPPPSGWEDPIKPPVNFDYVTMFDLPYPLLVEELGETEIAAVPAAAGYAGFAGGRPLTGSHMNYGLFLYAAGSTPPTDSQVELVNSFTPVAVLGEAIQEITDPVITVAVSPTTDMVNVRAGDWVIVGTAADPVREMMCVAEDPGASPVALKLTRAVADTYPRAVPAGTPLFVVGTFFGTDQVERVDGEDVAGYGRPKNGKGSYAGPYTYLEAEMVARQGRPYPAAAFKVDGVFTPSLSEDKKVVELTWAHRHRVQQSNQAVSWLASGNVGPETGVTYRVQQVALDEQQVKISDLPALPVGGVDHLSLDLMDQPYPDAARYARISVEAVRGGIVSLQNRPVTVKLAARLFAPTNLRAEYVPLPRLVAPDHLRADYLPGSSPLLAPNSLRADYVSGKVALLAPDHLSAVFDSGKVELVAPDHLRAVYVGPGKLVAPDHLVAQYVGQAKLVAPDHLVARYVPASAPLYEPSGLRAIYVGPGKLAAPDNLVARYVGQGKLVAPSGLRASFVPATAPIYEPSNLQAVYVGPSKLVAPDHLAAQYVGLVKLLAPTGLTAEFVPATLPIYEPSDLRAQYVGLAKLVAPSSLAAQYEGVHVLNRPDMLRADYLGIPKLAAPTGLKADYI
Physico‐chemical
properties
protein length:1472 AA
molecular weight: 159905,33070 Da
isoelectric point:5,85830
aromaticity:0,09579
hydropathy:-0,07099

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH46642.1
1 1472
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,9694
Central domain 164 362 200 0,4651
C-terminal 363 1472 1109 0,0662
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-163
Central
164-362
C-terminal
363-1472

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage LAh_7
[NCBI] 		2591031 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH46642.1 [NCBI]
Genbank nucleotide accession
MK838113 [NCBI]
CDS location
range 28295 -> 32713
strand -
CDS
ATGGGCAGAAAAAAGAGCCAAACAGTCGGATACCGATACTTTGTAGGGGTCCACTTCGTACTGTGTCACGGCCCTATCGACCGCATACTGCAGATCAAGGTGGACGATAAGGTCCTATGGACGCCGTTACATGACCAGCAGGGCGTGGGCCAGATTGGCGGCTATGAGACAATCACGGTAGATGCCCCAGGGCTGTTTGGCGGGGAGGACCGGGAAGGTGGCGTATCTGGTGAGCTGGACGTCGGTTTCGGTGATCGCACCCAGGGCAAAAACGGCTACCTCCAGCAGGTGCTCCAGGGCAAACTCCTCCCGGCATATCGTGGCGTCGTGTCGGTCATCCTGCGCAAAATGTACGTCGGGACAAACCCCTACCTGAAACCCTGGAAATTCCGCGTCCAGCGCATCTGGGCACCCACCGCTACTAATAAACCCCAGTGGTCCCCGCCCAACGCCGGTATCGGCCTACCCGGCGATCAGTACGTCCTGCGTGACGTGTTCGGCCCGGACTACGGTTTGTTCGGGAGCGCGTCTACCATGTTCGACGGTCGCCTCTATACCGTCCGCAACAAGCGGGTCAACGCGGAAGATACCGGCGCAGCGATCGGTGCGAATACCCCGTCCGGCATCACCCTAGTGGTGCATGACTACAACACGGGTAAAGTCACCATCGTGGACGACGTGCCGCGCAAGGCCCCGTATGTCGGTTTTCACATCCGGCCGATGACCGATGATGTGATCACCATCGACGGTGGGCGCAAGCTCCTGTACCCGCTCTGCGTAGACCGGACCAATAGCCAGTTCAAGTACCACTATGCGGCCATCTTCGACGTGGTGGACCGGACTGTCACCAGGATCCAGTACCCAGCCTCGCCGCTCATGGCCAACAACCGCAATTTCGTGTACCCGTCCGGGCTCAGTGCGGCTCAACGCAGTTACCTCGGGGTCCGGTTTGCCGCCGCGTGGGATGACGACATCGACGGCCATTACATCGTGCTGGGGCCGCAGGGCAGCAGCTACAAGCTGATCCCGCTCCGGGGCGAAGTGGTCCAGCTCTACAATGACTCCCTGGTACCGGTGAACGGCTACCGGCTCGGGTACCAGAAAGCCCCGCAGCGCCGCCTGTTCGTGTTCTGGTACACCCGTTTTGACATCCAGGGGGTCTGGCGCGACCAACTTAATGCGGCCATCCACGACACCGAGACCGGCATGGTCATCTGGGAGTCCGGCCCCACCCTTATCCCCGGCGGCGCGTTCAAGTTCGACAACTTCACCAGGGTTAGCAACCTGGCCGACATAAGTATCATGTGTGCGCCGGACGGGTTCGTTTATGTGTTCCTGTCTCGCACCATGGCCGCATACTTCGGAAAACGGGTGCTGGTCTACAACACGATCAGCCCGCCTGGCTCGTCACCTGAGCTCACCGATATGGGGCTCCCCTGGTACAAATACACCGGGATAGATGGCTATACCGTCGAGACCTCCTGGTACCAGGGGCATGCTTGCGGGACCTTCAAACAGCCGCGCACCGGCTTAGACGGCCAGCTTTACGGGTTCAGCGCATTCAGCACTGAGCCGGGTTTCATATTGAATCCAGGTATGGGTCCGGGTTTGTCCCGCGGTTCGGTGTCGCTGATGCCGTGGAACGGTAATGGCTCGGTAGACCTGAGTCATGGGGCGACGGTGGATTCGGCCGTATTCGTGTGGCACGGCCTGCCGGTGGCCATTACGCCCCGCTGGATCGGCAGCACGGCAGAGTTCGAGACCCTGACGCCCCTAGTGTCGCCAGATAACGGTGTGGCCACGACGATCTCCCCTGGGCCGTGGGACATGAACCCGATCCACATTATCCGGGAGTGCATGACCAACACGGAATGGGGGCGCGGCCTGCCGGACTCCATCATCGGCCCGTCATACGCCAAAGCCGCCCAGACGATCTACAAGGAAGGCCTCGGCTTATCCATGCTCTGGACGTCAGAGATGGCGGTCAACGACTTCATCCTGGAGGTGATCCGTCACATCGACGCCGTGCGCTACGAGGACCCGGAGACCGGCCTCCAGGAGATAAAGCTGATCCGGCCGGACTATGACGTGGCCACCTTGCCGGTGCTGAGCCCGTCAAACTGCCGCATCGAGCAGCTGACCGCCCCGACCCTGTACGACCTGGTCAACCAGATCACCATCGAGTTCTGGAACCGGGACACTGGCGAAGACTCAGCACTGGCCATCCAGGACACCGCCGCGATCAATATGTCCGGCACGGTCAACAACCAGACCATGCAGTATGCCGGGATCTGCTCCGAGCGCGTGGCGCTGCTGGTCGGCCAGCGGGACTTGGCGCGCTACTCCAAGCCGTTCCGCCAGGGGCGCCTGATCGTCAACCGGAAGGTGGCGAACATCAAACCAGGCGACCCCTTCATCCTCAATTGGCCGGCGCGCGGTGTGACTCAAATGGTCTGCCGAGCGGCCAAGCGGTCTGACAACGGCGAGCTGGACGGGATGATCGGTATCGAGTTCGGCGAAGACATCTTTTCCGCACCGTACAACGTGGCCAATGTGCCGCCACCGAGCGGGTGGGAGGATCCCATCAAGCCGCCGGTCAACTTCGACTACGTGACCATGTTCGACCTGCCGTATCCGCTACTGGTGGAGGAGCTGGGGGAGACCGAGATCGCAGCCGTGCCGGCGGCGGCCGGTTATGCCGGGTTCGCAGGCGGGCGGCCGCTGACCGGGTCACACATGAATTACGGCCTGTTCCTCTACGCGGCAGGGTCTACCCCACCAACGGACAGCCAGGTCGAGCTGGTGAATTCGTTCACCCCGGTGGCGGTGCTGGGCGAGGCTATCCAGGAGATCACTGACCCGGTCATCACCGTGGCGGTATCGCCTACCACCGACATGGTGAACGTGCGCGCCGGCGACTGGGTGATCGTGGGTACTGCTGCTGACCCGGTGCGCGAGATGATGTGCGTGGCCGAGGACCCTGGCGCATCTCCGGTGGCCTTGAAGCTGACTCGCGCCGTGGCCGACACCTACCCGCGCGCCGTGCCGGCGGGCACTCCGCTGTTCGTCGTGGGGACCTTCTTCGGCACCGACCAGGTGGAGCGGGTAGACGGCGAAGACGTGGCGGGCTACGGTCGGCCGAAGAACGGGAAGGGGTCCTACGCCGGGCCGTACACCTACCTGGAGGCCGAAATGGTGGCCAGGCAAGGGCGGCCGTACCCGGCGGCGGCATTCAAGGTGGATGGGGTGTTCACTCCCAGCCTGAGCGAGGATAAGAAGGTCGTCGAGCTCACCTGGGCACACCGCCACCGGGTCCAGCAGTCAAACCAGGCGGTATCCTGGCTGGCCAGCGGTAACGTGGGCCCTGAGACCGGCGTCACCTACCGGGTGCAGCAGGTGGCCCTGGACGAGCAGCAGGTCAAGATCTCCGATCTGCCGGCGCTGCCGGTGGGCGGGGTGGACCACCTCTCCCTGGACTTGATGGATCAGCCGTATCCCGACGCGGCCCGCTATGCGCGGATCTCGGTCGAAGCGGTACGCGGCGGTATCGTCTCACTGCAAAACCGGCCGGTAACGGTGAAACTGGCGGCCCGCCTGTTCGCCCCTACCAATCTGCGCGCTGAGTATGTCCCGCTGCCGCGGCTGGTGGCACCGGACCACCTGCGGGCGGACTACCTGCCTGGTAGCTCGCCGCTGCTGGCACCGAACAGCCTCCGCGCTGACTATGTGAGCGGCAAAGTCGCGCTGCTGGCGCCGGATCACCTGTCCGCCGTGTTCGACTCGGGCAAGGTAGAGCTGGTGGCACCAGACCACTTGCGCGCGGTCTACGTCGGCCCAGGTAAGCTGGTGGCCCCGGATCACCTGGTCGCCCAGTACGTCGGGCAGGCCAAGCTGGTGGCGCCGGATCACCTGGTCGCCAGATACGTGCCGGCGTCGGCCCCGCTGTACGAGCCGAGCGGTTTGCGCGCCATCTACGTTGGACCTGGCAAACTGGCAGCGCCGGATAACCTGGTCGCCCGTTATGTGGGCCAGGGCAAACTGGTTGCGCCGTCAGGGTTGCGGGCGTCCTTCGTGCCGGCCACKGCGCCGATCTATGAGCCGAGCAACCTGCAGGCGGTCTATGTCGGGCCGAGTAAGCTGGTGGCACCGGATCACCTGGCGGCGCAGTACGTTGGCCTGGTTAAGCTGCTGGCCCCCACCGGGCTCACCGCTGAGTTCGTGCCGGCGACGCTGCCCATCTATGAGCCGAGCGACCTGCGCGCTCAGTACGTTGGACTGGCCAAACTGGTTGCCCCGAGCAGCCTGGCGGCCCAGTATGAGGGCGTCCACGTTTTGAACCGCCCCGATATGCTGCGGGCAGACTACCTGGGGATCCCGAAATTGGCGGCCCCGACCGGTCTCAAAGCGGATTACATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
91278c53d75f05c030ede5a7407d851f789b030e9930079e44b6e6bdff39f0ce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6374
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages capable of disrupting biofilms from clinical strains of Aeromonas hydrophila with intrinsic antibiotic resistance Kabwe,M., Brown,T.L., Speirs,L., Ku,H., Leach,M., Chan,H.T., Petrovski,S., Lock,P. and Tucci,J. 2020-02-14 — GenBank