Protein

View in Explore
Genbank accession
YP_007677375.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MSQLNVGKVNVTGDGVQYPQYTNSNRPSGTTGLVIYNTSESKLQVYTGSEWESVGADEDTGPGTGGIQISRGNRSQRPNSDSPWNRESLLRYNTENTTLESYFNVSQSGSGGRDGWYAVGGKQMVYHMSARTGAWNSWDARWGTTYQAADYYQYKFYITTADPNGADRFWLRYWRADNNISTNGYYFSGEWWHSNDGGSRQNSQNNSYWPITVVNNNSYRMAPTGEGGYQGEIFMSNTPNNNNMNFWNMYCNYNYWSQQECGTGWQGCQWTGPTQSGTGYPISGFRIGHQDGNSVRASNNGTNTIISVFGVAGSEAKEWSGSW
Physico‐chemical
properties
protein length:323 AA
molecular weight: 36154,40920 Da
isoelectric point:5,43781
aromaticity:0,14861
hydropathy:-0,92693

Domains

Domains [InterPro]
DC_0326
STR
1–66
DC_0326
YP_007677375.1
1 323
Architecture
STR
STR 1-66 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SSM4
[NCBI] 		536466 Uroviricota > Caudoviricetes > Pantevenvirales > Greenvirus > Greenvirus ssm4
Host Synechococcus sp. WH 8018
[NCBI] 		166322 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007677375.1 [NCBI]
Genbank nucleotide accession
NC_020875 [NCBI]
CDS location
range 156120 -> 157091
strand +
CDS
ATGTCCCAACTAAACGTAGGAAAGGTTAACGTCACTGGAGATGGCGTACAATATCCTCAATATACAAACAGTAATCGTCCGTCAGGAACTACTGGACTAGTAATCTACAATACTAGTGAAAGCAAACTCCAAGTTTACACAGGTTCTGAGTGGGAATCTGTTGGTGCTGATGAAGATACTGGTCCTGGTACTGGTGGTATCCAGATCTCTAGGGGTAACAGATCTCAGAGACCTAACTCCGACTCTCCATGGAACAGAGAATCATTACTTAGATACAACACTGAGAACACAACTCTGGAATCGTACTTCAACGTTTCTCAGTCTGGTTCTGGTGGTCGTGATGGTTGGTATGCAGTTGGTGGTAAGCAAATGGTCTACCACATGTCTGCAAGGACTGGTGCTTGGAACTCTTGGGACGCTAGATGGGGTACTACATATCAGGCTGCTGACTACTATCAATATAAGTTTTACATTACTACTGCTGACCCGAATGGTGCTGACCGTTTCTGGTTGAGATACTGGAGAGCAGACAACAACATTTCTACCAACGGTTACTACTTCTCTGGAGAATGGTGGCACTCCAATGACGGTGGATCTAGACAGAACTCACAGAATAACTCTTACTGGCCTATTACAGTTGTTAACAACAACTCCTACCGTATGGCACCTACTGGTGAAGGTGGTTATCAGGGTGAGATCTTTATGTCTAACACCCCTAACAACAATAACATGAACTTCTGGAACATGTATTGTAACTACAACTACTGGTCACAGCAGGAATGTGGTACTGGTTGGCAGGGTTGTCAGTGGACTGGTCCTACTCAGTCTGGTACTGGTTATCCGATCTCTGGTTTCAGAATCGGTCACCAAGATGGTAACAGTGTTCGTGCATCTAACAATGGTACTAACACAATCATCTCGGTCTTCGGTGTTGCTGGATCCGAAGCAAAAGAATGGTCTGGTTCTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4edc01fa35dacf06e6512529831f0632d13cd9a12456e53e3f58e7ffe54d589
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5862
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM4 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank