Protein

View in Explore
Genbank accession
AAY16488.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATNFGTLFPTKSHAEWQKLNPLLLDGQGAYERDTGALKIGDGSTLYNDLPYFVGSVQGLSDEQLDALIPGTFDVTKYGAVGNGIHNDTDGIMAAISAAHDAGGGTVVFPAGTYRVWDSIGNDSDLISNVTITAPGNNTAKILANGNFAPLAGAFYRCTIQGLTLDAGGHGAPSANLHMVETTLADCILEGWNGSGLRLNDGTYGDVGLLNYVVRNHIVQNTGIGIFQTYRWVDSWIIDNNIGSTDANLSLEGGPLRVLGNHLNGAPIRNIDLRGNKRIIISNNILEGSREEAIRYLMPSWLTEDSPQVVISSNNFSNGGKAAAGVHPCIRVKGVSGTALVEGFSVVSNLFACEDAGSGWSHAVLFENAKDSTVVGNQWESAYSVAPIGKVGTTSGIESAGNTSGNTQYVGSSTETNKAYGTNSSGVNIMWAVSSSPTAQTLALRGTGGTTQVGAAIAANHAPQKQQMDAAVATATLASGAVPFIADQWYSMPYSSNTTRQASANGESRFGRFVAGRACTLTEIGCEVTVAGTAGAVLRFGIYAYDPVTGTVGSLLVDAGTVEAETVGFKSKVISVPVTAGQHILAGCVVQGNPTTRPTLRSMNGTDPFITNNDGASVSANGFQNFTNNMTGALAATPGFGRGGTGAMFKVLLRAAA
Physico‐chemical
properties
protein length:657 AA
molecular weight: 68088,08930 Da
isoelectric point:5,32368
aromaticity:0,07458
hydropathy:-0,02694

Domains

Domains [InterPro]
SSF69349
STR
9–180
SSF69349 DC_0830
IPR011050
STR
68–409
IPR011050
IPR012334
STR
72–474
IPR012334
IPR024535
ENZ
73–149
IPR024535
AAY16488.1
1 657
Architecture
STR
STR 9-656 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAY16488.1
1 657
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,9780
Central domain 87 408 323 0,9913
C-terminal 409 657 248 0,9806
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-86
Central
87-408
C-terminal
409-657

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GTE5
[NCBI] 		319522 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Gordonia terrae
[NCBI] 		2055 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAY16488.1 [NCBI]
Genbank nucleotide accession
AY846870 [NCBI]
CDS location
range 145 -> 2118
strand +
CDS
ATGGCGACCAACTTCGGGACGCTCTTTCCGACGAAGTCGCACGCTGAATGGCAGAAGCTCAACCCTCTGCTCCTCGACGGCCAGGGGGCCTACGAGCGCGACACCGGCGCGCTGAAGATCGGCGACGGGTCGACGCTTTACAACGACCTTCCCTACTTCGTCGGGTCCGTCCAAGGTCTCTCCGACGAACAGCTCGACGCACTCATCCCGGGCACATTCGACGTTACGAAGTACGGCGCCGTCGGCAACGGGATTCACAACGACACCGACGGCATCATGGCGGCGATCAGCGCCGCGCACGACGCCGGAGGCGGGACCGTGGTGTTCCCGGCCGGGACGTACCGCGTCTGGGACAGCATCGGCAACGACAGCGACCTGATCAGCAACGTCACCATCACCGCGCCGGGAAACAACACTGCGAAGATCCTGGCCAATGGCAACTTCGCGCCGCTGGCCGGAGCGTTCTACCGATGCACGATCCAGGGGCTAACCCTCGATGCCGGAGGGCACGGCGCCCCGTCGGCGAACCTTCACATGGTCGAGACGACCCTAGCCGATTGCATCCTCGAAGGCTGGAACGGGTCCGGCCTGCGACTCAATGACGGCACGTACGGCGACGTTGGCCTGCTGAATTACGTTGTGCGCAACCACATTGTGCAGAACACCGGCATCGGGATCTTCCAGACCTACCGCTGGGTCGACTCGTGGATCATCGACAACAATATCGGGTCCACCGACGCGAACCTATCGCTTGAAGGCGGCCCGCTCCGGGTGCTCGGGAACCACCTCAACGGAGCCCCGATCCGAAACATCGACCTTCGCGGCAACAAGCGAATCATCATCTCCAACAACATCCTTGAAGGATCGCGGGAGGAGGCGATTCGGTATCTCATGCCGTCCTGGCTCACCGAGGACTCGCCGCAGGTCGTCATTTCCAGCAACAACTTCTCCAACGGGGGTAAGGCCGCTGCTGGTGTTCATCCCTGCATCAGGGTCAAGGGTGTGTCGGGGACCGCGCTGGTCGAGGGGTTCTCGGTAGTGTCGAACCTCTTCGCCTGTGAGGACGCTGGGTCCGGCTGGTCGCACGCGGTGCTGTTCGAGAACGCCAAGGACAGCACGGTCGTCGGCAACCAGTGGGAGAGCGCATACTCCGTTGCCCCGATCGGAAAGGTCGGGACGACGTCCGGAATCGAGTCCGCGGGCAACACCAGCGGGAACACCCAATACGTCGGTAGCTCAACAGAGACGAACAAGGCCTACGGAACTAACAGCTCCGGAGTGAACATCATGTGGGCAGTGTCGTCCTCGCCGACGGCCCAGACGCTCGCGCTCCGCGGCACCGGAGGTACCACCCAGGTCGGTGCAGCGATCGCGGCGAACCACGCACCGCAGAAACAGCAGATGGATGCGGCGGTGGCGACCGCGACGCTGGCTTCTGGCGCTGTTCCGTTCATCGCCGATCAGTGGTACTCGATGCCCTACAGCAGCAACACCACCCGGCAGGCCAGCGCCAACGGAGAGTCTCGGTTCGGCCGATTCGTCGCGGGGAGAGCTTGCACCCTCACCGAGATCGGGTGTGAGGTCACGGTCGCTGGTACGGCAGGGGCCGTTCTGCGTTTCGGGATCTACGCTTACGACCCTGTGACCGGGACTGTCGGGTCTCTGCTGGTGGACGCCGGAACCGTCGAAGCCGAAACGGTCGGGTTCAAGAGCAAGGTGATCTCGGTACCGGTGACCGCTGGGCAGCATATCCTCGCGGGGTGTGTGGTGCAGGGCAATCCTACGACCCGTCCTACCTTGCGCTCGATGAACGGCACGGACCCCTTCATCACAAACAACGATGGAGCGTCGGTCTCGGCGAACGGCTTCCAGAACTTCACGAACAACATGACCGGCGCGCTCGCCGCGACCCCCGGCTTCGGTCGAGGAGGCACTGGCGCGATGTTCAAGGTGCTTCTCCGCGCCGCGGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
74a023f622ede285a0a021ab451b3800b3572e4f292b8266b5a47d76d8083f1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Partial genome sequence of Gordonia terrae phage, GTE5 Thomas,J.A., Soddell,J.A. and Dyall-Smith,M. 2010-01-28 — GenBank