Protein

View in Explore
Genbank accession
UVD31959.1 [GenBank]
Protein name
structural protein 2
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTQNIEQRTEVAVKTYEGAASSVNEIAHTDKEVETPAGMRKSFPRISREWDDESKRLQVEWNNDSSTLREDWKNERNELSTKALGVKPWEAGQSENNINQQRRWTDNHTYLPKSVPVVMDVSGPDDNWIPYTADKSDVLSSVFGRKPVELIEGVTLIPDSGQQYPKVSALGKTWELNDSDQQITVKSFTESSNGYLIVTLDNDEQVIAVKVSGASRDWVENKATVSVLSTAIKRTLSDKASDVISVKDFGAVPDEESDTPVDNTDAIQKAIDTAYNLLLKGAEIRFPPGTYRYRRIIPRSNITLSGGAAGSSFLKCIATGEDKPGLGILSSIRKEDDGSRVYRFGMKNLLIGPTDTQVATAEDENQTLIGINLAGCERGNFENLTIMGCGYGAIVLARCEGGTEGLGFNNTVQDGNYNTFKNISLASCGKYNAEQAAIWFKYKANSNKFFGVFSKPVVNTYGIKHGNDNQIFGGTSESSRSIAVFGDMAMGNGFFGCRAEGLSGDGYLFKKGSRLNTVFGGWMTGVSGKNFNYDEAPVQTIMSSGTYYFGGEKFPPDSNVSRDHDAYNLITRALTSLDDEGRVFIKTKDFHNGVPLRLVLWGASSSGVSAEDPGPSVEFWSSDASTSQQPIQAKVQAVYNGSGGGFHLDIYLGGGSNAPLEKVLRIDASQKTLVMPNLPVGNGVPPSKLATGGFWVDSSNDNVVKIK
Physico‐chemical
properties
protein length:707 AA
molecular weight: 76895,72120 Da
isoelectric point:5,21483
aromaticity:0,08769
hydropathy:-0,43932

Domains

Domains [InterPro]
DC_1123
ATT
1–235
DC_1123 IPR011050
DC_2184
STR
185–704
DC_2184
IPR012334
STR
222–492
IPR012334
IPR024535
ENZ
244–386
IPR024535
UVD31959.1
1 707
Architecture
ATT
STR
ATT 1-235 | STR 236-704 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVD31959.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 256 256 0,9903
Central domain 257 552 297 0,9797
C-terminal 553 707 154 0,9384
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-256
Central
257-552
C-terminal
553-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_Va_Val-yong3
[NCBI] 		2972438 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVD31959.1 [NCBI]
Genbank nucleotide accession
OP121182 [NCBI]
CDS location
range 15761 -> 17884
strand +
CDS
ATGACTCAGAACATTGAACAACGTACTGAAGTGGCTGTAAAAACGTATGAAGGTGCTGCTTCTTCTGTTAATGAAATTGCGCATACCGATAAGGAAGTTGAAACACCAGCAGGTATGCGTAAGTCTTTTCCGAGAATTAGCCGTGAGTGGGATGATGAATCAAAACGGTTACAGGTTGAGTGGAATAATGATAGTTCTACTCTTCGTGAAGATTGGAAAAACGAGCGGAACGAATTAAGTACCAAAGCCCTTGGAGTTAAGCCGTGGGAAGCGGGCCAGTCAGAAAACAATATAAACCAGCAGCGTCGTTGGACGGACAACCACACATATTTGCCTAAGTCAGTGCCTGTTGTAATGGATGTCTCCGGTCCTGATGATAATTGGATCCCATACACCGCCGACAAGTCGGATGTTTTGAGCAGTGTGTTTGGTCGCAAGCCAGTCGAGTTAATTGAAGGCGTCACTTTGATTCCTGATAGTGGTCAACAATATCCAAAAGTTAGCGCTTTAGGGAAAACATGGGAGTTAAATGATAGTGATCAGCAAATCACAGTAAAATCATTCACTGAATCATCCAATGGTTATTTGATTGTGACGCTTGATAATGATGAACAAGTAATCGCAGTCAAAGTGTCTGGTGCGAGCCGTGATTGGGTAGAAAATAAAGCCACTGTATCGGTTTTATCTACAGCAATAAAGAGAACATTGTCTGATAAAGCGTCTGATGTCATTTCTGTCAAAGACTTTGGTGCAGTGCCGGATGAGGAATCTGATACTCCAGTTGATAATACTGACGCTATTCAAAAAGCCATTGATACGGCTTATAACTTGTTATTGAAAGGAGCGGAAATTAGATTCCCCCCTGGAACTTATCGTTATAGAAGAATCATCCCTCGGTCAAATATCACACTTTCTGGCGGTGCCGCTGGATCATCGTTCTTGAAGTGTATTGCGACTGGTGAAGATAAACCGGGTCTTGGAATTTTATCATCTATCAGAAAGGAGGATGATGGAAGCCGTGTTTATCGCTTTGGTATGAAGAATTTGTTGATTGGTCCAACCGACACACAAGTTGCTACGGCTGAGGATGAAAACCAAACACTGATTGGTATAAATCTCGCGGGTTGTGAACGTGGAAACTTTGAAAATCTCACCATCATGGGGTGCGGTTATGGTGCTATCGTTCTTGCACGTTGCGAGGGAGGAACAGAAGGACTTGGATTTAATAATACCGTTCAAGATGGTAATTACAATACGTTCAAGAATATTTCACTGGCCAGCTGTGGTAAATACAATGCAGAGCAGGCTGCAATTTGGTTTAAGTATAAAGCTAATTCAAATAAGTTTTTTGGTGTTTTCTCAAAGCCAGTTGTGAATACCTATGGCATTAAGCACGGTAATGATAACCAGATTTTTGGCGGCACCAGTGAATCGTCTCGTTCTATAGCCGTATTTGGTGATATGGCTATGGGTAATGGCTTTTTTGGTTGTCGCGCTGAAGGTTTGAGTGGTGATGGTTATTTATTTAAAAAAGGATCACGGCTAAACACTGTTTTTGGCGGATGGATGACTGGTGTATCGGGTAAAAACTTCAATTATGATGAAGCACCAGTTCAGACAATAATGTCTTCGGGGACCTATTACTTTGGTGGTGAAAAATTTCCACCTGATAGTAATGTTAGCCGAGACCATGATGCTTATAACCTTATCACCCGTGCATTGACGTCCTTGGATGACGAAGGCCGCGTTTTTATTAAAACGAAAGACTTTCATAATGGAGTTCCGTTGCGACTTGTTTTATGGGGAGCATCTTCATCCGGTGTCTCAGCAGAAGACCCAGGGCCAAGTGTAGAGTTCTGGTCGTCTGACGCATCAACAAGCCAACAACCTATTCAAGCAAAGGTCCAGGCAGTTTATAACGGTTCTGGAGGTGGTTTTCACTTAGATATTTATCTTGGTGGTGGCTCAAACGCACCTTTAGAGAAGGTTCTAAGAATTGATGCAAGTCAAAAGACATTAGTTATGCCTAATTTGCCTGTTGGAAATGGTGTGCCGCCATCGAAGCTTGCAACTGGAGGATTTTGGGTTGATTCATCTAACGATAATGTTGTAAAAATCAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
de4cdfbba74333683bd0a53ab8add09f21f094f4380370f2f01efa90d0c7bd83
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6903
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50