Protein

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Genbank accession
YP_009188797.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALIRLVAPERVFSDLASMVAYPNFQVQDKITLLGSAGGDFTFTTTASVVDNGTVFAVPGGYLLRKFVGPAYSSWFSNWAGIVTFMSAPNRHLVVDTVLQAMSVLNIKSNSTLEFTDTGRILPDAAVARQVLNIIGSAPSAFVPLAADAAAGSKVITVAAGALSVVKGTYLYLRSNKLCDGGPNTYGVKISQIRKVVGVSTSGGVTSIRLDKALHYNYYLSDAAEVGIPTMVENVTLVSPYINEFGYDDLNRFFTIGISANFAADLHIQDGVIIGNKRPGASDIEGRSAIKFNNCVDSTVKGTCFYNIGWYGVEVLGCSEDTEVHDIHAMDVRHAISLNWQSTADGDKWGEPIEFLGVNCEAYNTTQAGFDTHDIGKRVKFVRCVSYDSADDGFQARTNGVEYLNCRAYRAAMDGFASNTGVAFPIYRECLAYDNVRSGFNCSYGGGYVYDCEAHGSRNGVRINGGRVKGGRYTRNSSSHIFVTKDVAETAQTSLEIDGVSMRYDGTGRAVYFHGTMGIDPTLVSMSNNDMTGHGLFWALLSGYTVQPTPPRMSRNLLDDTGIRGVATLVAGESTVNARVRGNFGSVANSFKWVSEVKLTRLTFPSSAGALTVTSVAQNQDVPTPNPDLNSFVIRSSNAADVSQVAWEVYL
Physico‐chemical
properties
protein length:651 AA
molecular weight: 70068,98250 Da
isoelectric point:5,91810
aromaticity:0,09985
hydropathy:-0,01828

Domains

Domains [InterPro]
IPR057094
ENZ
1–71
IPR057094 IPR057095 IPR012334
IPR057094
ENZ
1–65
IPR057094 DC_0267 DC_1484
IPR011050
STR
359–533
IPR011050 IPR056204
YP_009188797.1
1 651
Architecture
ENZ
ATT
ENZ
STR
ENZ 1-64 | ATT 65-140 | ENZ 142-179 | STR 180-651
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009188797.1
1 651
Domain Start End Length (AA) Confidence
N-terminal 1 78 78 0,9855
Central domain 79 566 489 0,9942
C-terminal 567 651 84 0,9354
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-78
Central
79-566
C-terminal
567-651

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KpV41
[NCBI] 		1747282 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Drulisvirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009188797.1 [NCBI]
Genbank nucleotide accession
NC_028670.1 [NCBI]
CDS location
range 41928 -> 43883
strand +
CDS
ATGGCATTAATTAGATTAGTAGCTCCCGAGCGGGTGTTCTCCGACTTGGCGAGCATGGTAGCATACCCAAACTTTCAGGTGCAGGACAAGATTACCCTGCTGGGCAGTGCCGGTGGGGATTTCACCTTTACTACTACTGCGTCGGTAGTGGATAACGGAACCGTGTTTGCTGTACCTGGTGGGTACCTGCTCCGTAAATTCGTGGGTCCAGCATACAGCTCCTGGTTCAGCAACTGGGCGGGCATAGTCACGTTCATGAGCGCGCCTAATAGGCACCTGGTTGTGGACACGGTTCTGCAGGCCATGAGTGTGCTAAACATCAAAAGCAACTCTACTCTAGAGTTTACCGATACCGGAAGAATACTACCGGACGCCGCGGTTGCACGTCAAGTGCTTAATATTATCGGTTCTGCGCCCTCGGCGTTCGTACCGTTAGCAGCGGATGCTGCGGCGGGCAGCAAAGTCATTACGGTGGCTGCTGGGGCTTTGTCTGTGGTAAAAGGTACGTACTTGTATCTTCGATCTAACAAGCTGTGTGACGGCGGGCCTAACACGTACGGGGTAAAGATTTCCCAGATTAGGAAAGTGGTGGGAGTCAGCACCTCCGGTGGCGTCACCAGTATTCGACTGGATAAAGCGCTGCACTATAACTACTACCTGTCTGATGCCGCGGAAGTAGGTATCCCGACAATGGTGGAGAACGTAACCCTAGTATCTCCGTACATCAACGAGTTCGGCTACGACGACTTGAACCGGTTCTTTACTATCGGCATCTCTGCCAACTTTGCTGCGGACTTGCACATTCAGGACGGAGTTATTATTGGCAACAAACGCCCGGGGGCTTCTGATATAGAAGGGCGTAGTGCTATCAAGTTCAATAACTGCGTAGACAGCACCGTTAAGGGTACGTGCTTCTACAACATCGGATGGTACGGGGTAGAGGTGCTCGGCTGCTCAGAGGACACGGAAGTACACGATATCCACGCCATGGACGTACGCCACGCAATCTCTCTGAACTGGCAGAGCACTGCAGACGGGGACAAGTGGGGAGAGCCTATCGAGTTCTTAGGCGTTAACTGCGAAGCCTACAACACAACCCAGGCTGGGTTTGATACTCACGACATTGGTAAGCGTGTGAAGTTCGTTCGCTGCGTTTCGTACGACAGTGCTGACGATGGGTTCCAAGCGCGCACTAACGGGGTGGAGTACTTGAACTGTCGAGCTTACCGCGCAGCCATGGATGGATTCGCCTCCAACACCGGTGTAGCCTTCCCTATCTATAGGGAGTGCCTAGCTTATGACAACGTACGCTCTGGCTTTAACTGTTCGTACGGTGGTGGCTACGTTTATGACTGCGAGGCTCACGGTAGCCGGAATGGTGTGCGAATCAACGGGGGCCGTGTTAAGGGTGGTCGGTACACCCGCAACTCCAGCTCTCACATCTTCGTCACTAAGGACGTAGCTGAGACAGCGCAGACATCCCTGGAGATTGATGGCGTGAGCATGCGCTACGACGGTACCGGGAGAGCTGTGTACTTCCACGGGACTATGGGCATTGACCCTACCCTGGTATCTATGTCCAATAACGACATGACCGGTCACGGTTTGTTCTGGGCATTGCTGAGCGGCTACACTGTTCAACCTACGCCTCCGCGCATGTCCAGGAACTTACTGGATGACACAGGTATCCGTGGAGTGGCAACGCTGGTTGCTGGCGAGTCTACAGTCAACGCCCGTGTACGCGGAAACTTTGGCAGCGTAGCTAACTCCTTCAAGTGGGTGTCTGAGGTTAAGTTGACGCGGTTGACCTTTCCCTCTAGTGCTGGGGCCTTGACGGTTACTAGCGTAGCTCAGAACCAGGATGTGCCTACACCTAATCCGGACCTAAACAGCTTCGTGATTAGGAGCAGTAACGCAGCGGACGTATCCCAGGTAGCCTGGGAGGTGTATCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0822c4dc1a5e78b8bb675ac32b3b2533445f6cee52d67031439ba14314c4e2ae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8640
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_KpnP_KpV41 lytic for Klebsiella pneumoniae Volozhantsev,N.V., Krasilnikova,V.M., Komisarova,E.V., Kislichkina,A.A. and Myakinina,V.P. 2017-09-14 — GenBank