Protein

View in Explore
Genbank accession
XCO38834.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MGYFQMTRNVEEIFGGVVVAPHQIPFKYTSTNGGETFLSLPFYPITGFVTINGGVQVPLDNFEIDGNTLNLGRELDPGDVVFCLFDKIMSPQDASNSAVRIYKFLSVGGETEFTPDFTTYGVQSLYIDGKYKTPGEDYNYFKTSGKVVLDTALPTGVWVVAEMSIKQNIPALAGDNGASEIGTESGKTVQETLDDIGYNLASVEKLMTDVTDMSPVHTHGFYKSMDGGHGDWYKTGNTDLTKAGTHDVTKALVYNAKGTEYALNVAVDKISVLANGAKGYDYADCIDKTTDDFVCLGQVINGIESHLTLGVSIANNIDTYDGGKRLNIIVPTDGYRIGKEAAKLYSGVAYKLNAARIFVFAGASYQYSITGKRLNGFQHGVDEITEKWEAVNRGIYWGSVSLQNTSIHGGTLFGDHTIRSLRDDCSSGVGVLALNPEGFSTHGLIIRETFMWAMVETTAEVEATEFNQNGHAFDNDSIDYKYIVDAWVNAGITSRFGNFNRTTHYNSKFMGGRRGTYRNGCDWSGLYNCEVTNRLAWRNAANVSGEIPEYIAVCTGTALDVSGGYWGPAAAKDYNARYGTVYSTAQNHSFKAVYTEWTYNFITISAWGFNGKASRLQGLHLDVVSVYKDNFMDYSQIRFEGGCFGTVDDGGNYTYPAGFTHYDTPNGQTQFSYGTPVRDIGAFRHNGFDFKYGPYNMYLTAGTDWDSWRDRPYAKEMFNPYGMQINSGTAFLPWQIPAIKSMVCFWIKDLTGNFDPRNIVAWITAASQDGSANTDEALYKSFAEKVVDFGNGYKMLMLAQKRLSAWDGQYTFARNANITITVPAETPIVLKAVEAYTGGIPIFPNGCGNYTPESNGASILSPVTNQVGLDGSLGGGLFFNGDIIGPWVHMRRTASGYRYVPSLTAGYTLSRKMVTGGYALDAAYKVAFNATITAVNSNNTTIVEVPTAQLPYIAVGIPLYVTGGSSTSATGTFHLIKRIANADGTSSARYLVQGVLGAVGDVLTVDQNQLSSYTFFNDMNYNALTAATLVLTGTSQATAHRSSVSAGIGYNGASGTKAMEWYFNGGTTPSHRLVATTVSGMTLEAGGNFSVVGNTFPSADGTYSLGTSSSRWTQVFATNSTIATSNRDKKTNIRQITPVEVSAFYEIAMLNSVWQWMEKYQVEGDDARLHSGPTVQDAIEIMDKYGLDWTKYSAFCYDKWDARDAVIETWDAEYETIPGTPAEYDEEGKLIVEAVPEVKVLVREAGSKVIEPALEAGEDYAFRKEELLFWITRAIVQKQKDIEIRLSDLESKFK
Physico‐chemical
properties
protein length:1294 AA
molecular weight: 141660,57200 Da
isoelectric point:5,09808
aromaticity:0,12210
hydropathy:-0,22628

Domains

Domains [InterPro]
DC_0063
STR
1–730
DC_0063 IPR036388
IPR030392
CHP
1125–1186
IPR030392
IPR030392
CHP
1125–1293
IPR030392
cd10144
CHP
1125–1278
cd10144
XCO38834.1
1 1294
Architecture
STR
RBD
STR 1-730 | RBD 1111-1293 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38834.1
1 1294
Domain Start End Length (AA) Confidence
N-terminal 1 278 278 0,9834
Central domain 279 1019 742 0,9836
C-terminal 1020 1294 274 0,9352
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-278
Central
279-1019
C-terminal
1020-1294

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146021
[NCBI] 		3232201 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38834.1 [NCBI]
Genbank nucleotide accession
PP889471.1 [NCBI]
CDS location
range 139336 -> 143220
strand +
CDS
ATGGGGTATTTTCAAATGACCAGAAACGTAGAAGAAATCTTCGGTGGGGTAGTCGTAGCACCGCATCAGATCCCGTTCAAGTACACTTCAACAAACGGTGGGGAAACTTTCCTTTCCCTGCCATTTTATCCCATCACCGGATTTGTTACTATCAACGGTGGTGTGCAGGTTCCTCTTGATAATTTCGAAATAGACGGGAATACATTAAATCTTGGTCGCGAACTGGATCCAGGGGATGTTGTATTCTGTTTGTTCGATAAAATCATGTCTCCTCAAGATGCGAGCAATAGTGCGGTTCGTATCTACAAATTCCTTTCTGTTGGGGGTGAAACAGAATTTACACCTGATTTCACAACTTATGGTGTACAGTCTTTGTACATAGACGGGAAATACAAAACGCCCGGTGAAGATTACAATTATTTCAAAACTTCAGGTAAGGTTGTTCTTGATACAGCATTACCAACAGGTGTTTGGGTCGTTGCCGAGATGTCAATTAAGCAAAATATCCCGGCGCTGGCTGGTGACAATGGCGCAAGTGAAATTGGCACAGAATCCGGCAAGACCGTTCAAGAGACTCTGGATGACATCGGTTATAACTTGGCTTCCGTAGAAAAACTGATGACAGATGTAACAGATATGTCACCAGTACACACTCATGGTTTCTATAAGAGTATGGATGGTGGGCATGGTGACTGGTATAAGACAGGTAATACTGATCTGACCAAAGCTGGTACACATGACGTAACTAAAGCCTTGGTTTATAATGCCAAAGGCACAGAATATGCTTTAAATGTTGCTGTGGATAAAATTAGTGTCTTAGCTAATGGTGCTAAGGGTTACGACTATGCCGACTGTATTGATAAGACTACGGATGACTTTGTATGTTTAGGGCAAGTCATCAATGGCATTGAATCTCATCTCACACTTGGCGTATCTATTGCTAATAACATCGACACTTACGATGGAGGCAAGCGTCTTAATATTATTGTACCTACCGACGGATACCGTATAGGTAAAGAAGCTGCCAAGCTGTACTCCGGCGTAGCTTATAAATTGAATGCTGCTCGCATATTTGTATTTGCTGGGGCATCCTATCAATACTCCATCACCGGCAAACGTTTGAATGGCTTCCAGCACGGTGTAGATGAGATCACCGAGAAATGGGAAGCCGTGAACAGGGGTATTTATTGGGGTTCAGTTAGCTTACAGAACACGTCCATCCACGGAGGTACTCTATTCGGGGACCATACGATTAGGTCACTTAGAGACGACTGCTCCTCTGGTGTAGGTGTGCTGGCTCTGAACCCTGAAGGTTTCTCTACTCACGGTTTGATAATCCGAGAAACGTTCATGTGGGCTATGGTGGAAACTACCGCAGAGGTAGAGGCCACTGAGTTTAACCAGAACGGGCATGCATTCGATAACGATAGTATTGACTATAAATACATAGTTGATGCTTGGGTTAATGCTGGTATTACTTCCCGCTTTGGCAACTTTAACCGCACCACCCACTATAACAGTAAGTTCATGGGGGGCCGCCGTGGTACATATCGCAATGGCTGTGACTGGTCCGGTTTATATAACTGTGAAGTAACAAACCGTCTGGCATGGCGTAATGCAGCTAACGTATCTGGAGAAATACCAGAATATATTGCTGTTTGCACAGGCACAGCACTAGATGTATCCGGAGGCTATTGGGGACCAGCAGCAGCAAAAGATTATAATGCTCGCTATGGTACTGTTTACTCTACTGCACAGAACCATTCATTTAAGGCAGTGTATACAGAGTGGACTTACAACTTCATCACTATTAGTGCATGGGGTTTCAATGGTAAGGCTTCCCGTCTACAGGGACTTCATCTCGATGTTGTCAGTGTATATAAAGACAACTTCATGGATTATTCACAAATCCGATTCGAAGGCGGCTGCTTTGGTACTGTTGACGACGGCGGTAATTATACCTATCCGGCTGGGTTTACTCACTATGATACCCCTAACGGGCAAACACAGTTTTCTTACGGTACTCCTGTAAGAGATATTGGGGCATTCCGTCACAATGGATTCGACTTTAAGTATGGCCCTTACAATATGTACCTTACTGCCGGCACTGACTGGGATTCCTGGCGTGACCGTCCGTATGCCAAAGAGATGTTCAACCCATACGGCATGCAGATTAACAGCGGAACCGCGTTCTTGCCTTGGCAGATTCCTGCAATTAAGTCTATGGTTTGCTTCTGGATTAAGGACTTAACAGGCAACTTCGACCCACGAAATATTGTGGCGTGGATTACTGCTGCAAGTCAGGACGGCTCGGCAAACACCGACGAAGCATTGTATAAATCCTTTGCTGAGAAGGTCGTGGACTTTGGTAATGGTTACAAGATGCTTATGCTGGCACAGAAGCGCCTCAGTGCGTGGGACGGCCAGTATACATTTGCTCGTAATGCCAACATCACCATAACTGTACCAGCTGAGACTCCGATTGTTCTCAAGGCTGTGGAAGCATACACCGGTGGCATTCCTATATTCCCTAACGGGTGCGGAAACTACACTCCGGAATCTAACGGTGCAAGTATCCTGAGTCCTGTGACCAATCAGGTTGGTTTGGATGGTTCCCTGGGTGGTGGCCTGTTCTTTAACGGGGACATCATTGGGCCTTGGGTGCATATGCGTCGTACTGCTTCTGGGTACCGCTACGTACCATCCCTAACCGCTGGCTATACGCTTTCTAGGAAGATGGTGACTGGGGGCTACGCGCTGGATGCCGCGTACAAGGTGGCGTTCAACGCTACAATTACGGCGGTAAACTCCAACAACACCACTATAGTTGAGGTCCCAACTGCTCAGTTACCGTATATCGCAGTAGGTATTCCGCTTTACGTTACCGGCGGTTCGTCTACGTCTGCTACTGGAACTTTCCATCTCATCAAGCGTATTGCTAATGCAGATGGAACCAGCTCTGCACGGTATTTGGTGCAAGGTGTATTGGGTGCTGTTGGTGATGTTCTCACCGTAGACCAAAACCAGCTGTCAAGTTATACGTTCTTTAATGACATGAACTATAACGCCCTGACTGCCGCTACTTTAGTGCTTACGGGGACCTCACAAGCTACCGCCCACCGCTCCAGTGTATCTGCTGGGATAGGTTATAACGGAGCCAGTGGCACTAAGGCGATGGAATGGTACTTCAATGGTGGTACTACTCCATCGCACAGACTGGTTGCTACGACAGTATCCGGTATGACTCTAGAGGCGGGTGGTAATTTTTCAGTAGTCGGGAATACGTTCCCATCTGCTGATGGCACCTATTCTTTGGGTACATCGTCTAGTCGCTGGACTCAGGTGTTTGCAACTAACAGTACCATTGCAACATCAAACCGCGATAAAAAGACAAACATTCGTCAGATTACTCCAGTTGAGGTATCAGCATTCTATGAAATAGCAATGCTCAACTCCGTCTGGCAGTGGATGGAAAAATACCAGGTGGAGGGTGATGATGCTCGACTTCATAGTGGGCCAACCGTACAGGACGCCATTGAAATTATGGATAAGTACGGTTTGGATTGGACGAAGTATTCGGCATTCTGTTATGACAAATGGGATGCACGGGATGCTGTCATAGAAACATGGGATGCAGAGTATGAGACTATCCCAGGCACTCCTGCCGAATATGATGAGGAAGGGAAACTCATTGTTGAGGCGGTTCCTGAAGTCAAAGTGCTGGTGCGTGAGGCAGGTAGTAAAGTAATAGAACCGGCACTGGAAGCCGGAGAAGATTATGCATTCCGTAAAGAGGAATTACTGTTCTGGATAACCAGAGCTATAGTTCAAAAACAAAAAGACATCGAAATTAGATTATCTGATTTAGAAAGTAAATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
30cd87096b8226aff5abe0e97d0f76bded1c4113d41e920dfb038a17cf83f3ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank