Protein

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Genbank accession
AXH70933.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTDKVIARIKGDKYPSHDTNAEYLKLDEVWVDGDVYECIKDVPASMNIPITNTEHWKELLVTFKGGNTDTSHDVNGEYKAKDFLYIPEGIYECLQDITPNSNIPLTDTTYWKQLQGKPEAARNFDSHDVNTEYKQSDLVWVNGEVYQAQEDIPENSNVALTDTAKWKLLLTAPTATELTYENERLSNWIDEGNETWSHAIEVGDPVVAMTLFGIMVRKERMVSDPAELLRFGDLYIESDKVTIKWPHTPNLTEVYIARAPDEDNPTSMLTIDEAGQLVEDIDLTGGDITFHIKEPATLRRCTASISNTSGFQIEKKGTVLDRCETNHVIGTGYRVNAGAKLRRCRADGGEIAMFIGVNDQDDYVGREDEEIEIIDMEIVGPLDYMTRIYNTFKKVTFRRYRAYGSDSAGIYVNLGYGSGLVEITDSIITGCHSPLYVNDYNRATDVGPKIVSARNIYDSSNHKTVNYGTGALQWMGDSPNIGFVYSFADIFIGGGNAFGVKSGAVALRGPVKGRFYNPTIHIHSGLDTNNPPGCFGIDSDNCDLEIYNAIFTNYQVNTRRRLFEVFGTGNKLKVANSIFWAPDLIGTSVLFTINETDYTVDDVLQDNVYGSPNNFTLGDIIIERLMFKDPRYYNEAENLLVNQEGDEYVYWGRIAQAPNTDHSGFAYKSRSWDPGGTENCAVGAFHRQAGQINTTDYILKR
Physico‐chemical
properties
protein length:701 AA
molecular weight: 78590,63130 Da
isoelectric point:4,72601
aromaticity:0,10414
hydropathy:-0,43138

Domains

Domains [InterPro]
DC_1983
ATT
1–69
DC_1983 G3DSA:2.10.10.90
DC_1983
ATT
60–122
DC_1983
DC_1986
ATT
118–226
DC_1986
AXH70933.1
1 701
Architecture
ATT
ATT 1-226 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70933.1
1 701
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9812
Central domain 176 631 457 0,9885
C-terminal 632 701 69 0,8127
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-631
C-terminal
632-701

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70933.1 [NCBI]
Genbank nucleotide accession
MH595538.1 [NCBI]
CDS location
range 198535 -> 200640
strand -
CDS
ATGACTGATAAAGTTATTGCTCGTATTAAAGGTGATAAGTACCCAAGTCACGATACCAATGCCGAGTACCTAAAACTCGATGAGGTATGGGTAGACGGCGATGTGTACGAATGTATTAAAGACGTGCCAGCGAGCATGAATATCCCTATTACAAACACAGAGCACTGGAAAGAATTGCTGGTTACCTTTAAAGGCGGTAACACAGATACATCCCATGATGTTAATGGCGAGTACAAAGCCAAGGACTTCCTTTATATCCCAGAAGGCATCTATGAGTGTCTCCAAGATATTACCCCGAATAGTAATATTCCATTAACCGATACGACTTACTGGAAACAACTACAGGGCAAACCAGAGGCAGCGCGTAACTTTGACAGTCACGATGTTAACACCGAATATAAACAAAGTGATCTGGTATGGGTAAATGGCGAAGTCTATCAGGCACAAGAAGACATTCCTGAAAACAGCAATGTGGCTTTAACCGACACAGCCAAGTGGAAACTATTGTTAACTGCACCCACGGCAACCGAACTGACTTATGAAAATGAGCGATTGTCTAACTGGATAGATGAAGGCAATGAAACCTGGTCTCATGCAATCGAAGTTGGTGACCCGGTTGTTGCGATGACGCTATTTGGCATCATGGTCAGAAAAGAGCGTATGGTATCTGACCCTGCTGAACTATTGCGTTTTGGGGATCTTTATATAGAGTCTGATAAGGTGACTATAAAATGGCCTCATACGCCGAATCTTACCGAGGTTTATATTGCCCGCGCTCCTGATGAAGATAACCCTACGTCAATGCTTACGATCGATGAAGCAGGGCAACTAGTAGAAGATATCGATTTGACTGGAGGAGATATTACCTTTCATATAAAAGAACCTGCGACTCTTAGACGATGTACTGCAAGCATATCTAATACGTCAGGCTTCCAGATTGAAAAGAAAGGTACTGTTCTAGATCGATGTGAAACTAACCATGTCATTGGCACAGGCTATCGAGTCAATGCCGGCGCTAAGCTTAGACGTTGCCGAGCCGATGGTGGCGAAATCGCAATGTTTATCGGTGTGAATGATCAAGATGACTATGTCGGTCGCGAAGATGAAGAAATTGAAATCATAGACATGGAGATTGTTGGTCCTCTCGATTACATGACGCGTATTTACAATACGTTTAAAAAGGTAACATTCCGTCGTTACCGTGCATACGGCAGTGACTCGGCAGGCATCTATGTAAACTTAGGTTACGGCAGTGGACTAGTAGAAATTACGGATTCTATTATCACTGGTTGTCATTCTCCATTGTACGTCAATGACTATAACCGAGCTACTGACGTAGGGCCTAAAATTGTTTCTGCGCGAAACATATATGATAGTTCAAACCATAAGACGGTTAACTATGGTACTGGCGCGCTACAGTGGATGGGTGACTCTCCAAATATAGGCTTTGTCTATAGCTTTGCTGATATATTCATAGGCGGCGGTAACGCCTTCGGCGTGAAATCTGGCGCTGTTGCGTTAAGAGGTCCGGTAAAAGGAAGATTCTATAACCCGACTATTCATATACATAGCGGGCTGGATACCAATAATCCTCCAGGGTGCTTTGGCATTGATTCCGATAACTGTGACCTTGAAATATACAACGCAATATTTACCAATTACCAGGTAAATACCCGACGCCGCTTATTCGAAGTATTCGGCACAGGTAATAAGCTTAAGGTTGCGAACAGTATCTTTTGGGCACCTGATCTTATCGGCACTTCAGTCCTATTCACTATCAATGAAACAGACTACACTGTAGACGATGTACTGCAGGACAATGTTTATGGCAGTCCAAACAACTTTACACTGGGCGATATCATTATTGAACGTCTGATGTTTAAAGATCCTCGGTATTATAACGAAGCTGAAAATCTATTGGTCAATCAGGAGGGCGATGAATACGTTTACTGGGGTCGTATCGCACAAGCTCCAAATACTGACCATAGTGGCTTTGCTTATAAGTCTCGCTCATGGGATCCAGGCGGTACTGAAAACTGTGCGGTCGGTGCGTTCCATAGACAAGCTGGCCAGATCAATACAACAGACTATATCTTGAAAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
15c7dfb3a93da05ea92238ed9bf534a865aa59f25be600d9dcf85efdedcb8708
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6620
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank