Protein

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Genbank accession
QGZ17765.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSQVSDVNLANQGFASFRTELNNILGAINTSHLGSSAPSSVAQGTIWVDTGTSGFLKIKINDGSDNIELFSINITSNAITSTASVTGTITETDPNALPLAIALG
Physico‐chemical
properties
protein length:104 AA
molecular weight: 10668,70090 Da
isoelectric point:4,23311
aromaticity:0,04808
hydropathy:0,17212

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC026P
[NCBI] 		2686456 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17765.1 [NCBI]
Genbank nucleotide accession
MN698240.1 [NCBI]
CDS location
range 24782 -> 25096
strand +
CDS
ATGAGTCAAGTGTCAGATGTAAATTTAGCCAATCAAGGATTTGCTTCTTTTAGAACAGAATTAAACAACATTTTAGGAGCAATAAATACAAGTCATTTAGGCAGTTCAGCACCAAGTTCAGTTGCACAAGGCACTATTTGGGTTGATACAGGTACATCAGGATTTTTAAAAATTAAGATTAATGATGGCTCAGATAACATAGAATTATTTAGTATTAACATAACATCAAACGCAATAACAAGTACAGCATCGGTAACAGGAACAATTACAGAAACAGACCCAAATGCTTTACCACTTGCAATAGCATTAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2129338505c904c225879b8cb0b9705a34de5cc2525e1faca7d1ec5c3b31cac1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank