Protein

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Genbank accession
QFR59314.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTRFNTGNVIPSLAEEDFYDNSMALDEAMNSTDPTWRDRFGVEKPTIDAALKSAGFMPAGFDFVTGGTLQPGDRNKAVYNPAPNGDNNWYRWNGAFPKEIAANSQPNPKDENNWVLAHFRIGIVEKEALRRTYLEAGYNLVNGSFEQGGTLVNSNDVLLQERTGKVFTGPAGIVAAGTNPASGGFVDVSPFVLKTEPPLIAKTGSFSSGGRAESMKSALLSSDGYYYTPRTGVITAAPGSSPNSMWVCVGLLNGAPIDDMLNWLDGRPHLNAFIAARDSKSIRGGGVVTFPAGDYTFADEFVCVDYVKFVGEDRSKCRIFGAAGSGAGKAVVRACKSPVGSADIPEYLSYSGFSNCTINGNATWDVGLYVRHCTNESVFDNVTAQNCKKANSIFIGVFYVSAKNHVSRDARDLGAVIGKKIFSEGGLREVNASAFNNLRGNYAGLDDAYDPTTNPYAGACITIWTANSCAFDYVGAENAYGAGAIIRKGINSTIPNLYVESNGKGTAAVDKIGARIIAADFPSLIIGSLFATRQQKIYLEGSSLLQVGEIYSESFANGIFMGTGKVLLMNGHSANNYIGADQAFINNIETKRIAQFGNVPFTNFASLDSTAVIFGEAMTNVQVVMVPRVTLTTADPIVIGLSNSLSGGQVLEFGTSFTAGVPITKTFSKVSKGAGRLTHRSNYLPSTTTNFAMDVFIIQYVCDYQAIYNKWF
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76266,84300 Da
isoelectric point:5,84785
aromaticity:0,10815
hydropathy:-0,08736

Domains

Domains [InterPro]
DC_1559
ATT
1–132
DC_1559 IPR012334
IPR040775
RBD
60–107
IPR040775 DC_0018 IPR011050
G3DSA:2.10.10.80
ATT
60–117
G3DSA:2.10.10.80 IPR012334
QFR59314.1
1 712
Architecture
ATT
STR
ATT 1-199 | STR 270-608 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFR59314.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9941
Central domain 267 592 327 0,9832
C-terminal 593 712 119 0,9837
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-592
C-terminal
593-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage PS2
[NCBI] 		2653650 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila subsp. hydrophila
[NCBI] 		196023 Pseudomonadota > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas > Aeromonas hydrophila subsp. hydrophila

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFR59314.1 [NCBI]
Genbank nucleotide accession
MN453779 [NCBI]
CDS location
range 168843 -> 170981
strand +
CDS
ATGACTAGATTTAATACAGGTAATGTCATTCCATCGCTAGCCGAAGAAGATTTTTATGATAACTCCATGGCTTTAGATGAAGCCATGAATAGCACTGATCCAACTTGGAGAGATAGATTTGGAGTTGAGAAGCCTACGATCGACGCAGCTTTGAAATCTGCCGGGTTTATGCCGGCTGGATTTGACTTTGTAACTGGCGGGACTCTTCAACCTGGAGATCGCAATAAAGCTGTTTACAATCCTGCTCCTAACGGCGATAATAATTGGTATCGTTGGAATGGTGCATTTCCGAAAGAAATTGCTGCTAATAGTCAACCTAATCCCAAAGATGAAAATAATTGGGTATTGGCACATTTTAGAATTGGAATAGTCGAAAAGGAAGCACTTCGTAGAACATATTTGGAAGCAGGTTATAATCTTGTTAACGGTAGCTTTGAACAAGGTGGGACGTTAGTAAATAGTAATGATGTGCTGCTGCAAGAGCGCACAGGGAAAGTATTCACCGGCCCTGCGGGTATAGTTGCCGCCGGAACGAATCCGGCGAGCGGCGGGTTTGTTGATGTGTCGCCATTCGTATTGAAGACTGAGCCGCCACTGATAGCAAAAACAGGTTCATTCTCATCTGGTGGGCGTGCGGAATCTATGAAATCTGCGCTTCTTTCTTCAGACGGTTACTACTACACACCGAGAACTGGTGTTATCACAGCGGCTCCAGGATCATCTCCTAATTCTATGTGGGTCTGTGTGGGTCTGCTTAACGGAGCGCCCATAGACGACATGCTAAACTGGCTTGATGGTCGCCCGCATCTAAATGCTTTCATTGCTGCTCGCGACAGCAAGTCAATTCGTGGCGGCGGGGTGGTCACTTTCCCTGCTGGCGATTACACGTTTGCTGATGAATTCGTGTGCGTAGATTACGTCAAGTTTGTGGGTGAAGATCGTAGCAAGTGTCGCATATTTGGTGCAGCGGGTTCAGGAGCGGGAAAGGCTGTAGTGAGAGCTTGCAAGTCGCCTGTCGGTTCTGCTGACATACCGGAATATCTATCTTATTCGGGGTTTAGTAACTGCACAATTAACGGCAACGCAACTTGGGATGTTGGCCTTTACGTTCGCCACTGTACAAACGAATCTGTTTTCGATAACGTTACAGCGCAGAACTGTAAAAAGGCTAACTCAATTTTTATCGGCGTCTTTTATGTTAGTGCCAAAAATCACGTAAGCCGAGACGCACGTGACTTGGGTGCTGTCATCGGTAAGAAGATTTTCAGCGAAGGCGGGCTTCGTGAGGTTAATGCTTCAGCTTTCAATAACCTCAGAGGCAATTACGCAGGACTTGACGACGCCTATGATCCGACCACAAACCCATATGCAGGTGCCTGCATAACAATATGGACCGCTAACAGTTGCGCATTTGATTATGTTGGTGCCGAGAATGCTTACGGTGCTGGTGCTATTATCCGCAAAGGGATAAACAGCACAATCCCGAACTTGTATGTCGAGTCCAATGGGAAGGGCACTGCTGCTGTGGATAAGATCGGAGCCAGGATCATTGCTGCAGATTTCCCTTCACTGATCATTGGTTCCCTCTTTGCAACAAGACAGCAGAAGATTTATCTGGAGGGGAGCTCACTGCTGCAAGTTGGCGAAATCTACTCTGAGTCTTTTGCAAATGGAATTTTCATGGGCACAGGCAAAGTGCTGTTGATGAATGGCCACAGCGCCAATAATTACATTGGGGCAGATCAAGCATTCATTAATAACATTGAAACTAAACGCATTGCTCAGTTTGGGAATGTCCCTTTCACCAACTTCGCGAGCCTAGACTCCACAGCTGTTATTTTTGGCGAGGCAATGACAAATGTCCAAGTGGTGATGGTGCCTAGAGTAACTTTAACCACGGCAGACCCGATAGTCATTGGGCTGTCAAATTCTCTATCCGGGGGGCAAGTGCTAGAATTTGGGACATCGTTTACTGCGGGAGTGCCTATTACCAAAACGTTCAGCAAAGTTTCTAAAGGTGCTGGAAGACTTACTCACCGGTCAAATTACCTGCCATCTACAACAACAAACTTTGCAATGGACGTGTTCATTATTCAGTACGTTTGTGATTACCAGGCTATTTATAACAAGTGGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
65d396491d80cd4eb12b01cdb0cd1c2a0c582720d7d14740791247eb03a2d912
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7315
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage PS2 Rai,S., Tyagi,A., Kumar,N. and Singh,N. 2020-04-30 — GenBank