Protein

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Genbank accession
YP_009702237.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSLINLLVKRGPQLGSLQFDAVLSDDLDASVDIVQYPIETGTPIADHIIYQPIRYTMTGAVSNNPLKVSITDFTGALTNLVDDNPFIAAGAGLFAGWLSGSNETRSSTTLNTLLDFMYSGQVFTVDTGEITLNNMVIQRIGRSKDPENENGLIFVAELQQIVTLDRVANGSQPAQYQLNSNDVSSTSISGLIERGYINVKTAATNVASQVTTLLNL
Physico‐chemical
properties
protein length:216 AA
molecular weight: 23230,85580 Da
isoelectric point:4,32286
aromaticity:0,06481
hydropathy:0,05046

Domains

Domains [InterPro]
DC_0601
STR
1–215
DC_0601
IPR048494
ATT
19–163
IPR048494
YP_009702237.1
1 216
Architecture
STR
ATT
STR
STR 1-18 | ATT 19-163 | STR 164-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PEAT2
[NCBI] 		2053078 Uroviricota > Caudoviricetes > Jameshumphriesvirinae > Peatvirus peat2 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009702237.1 [NCBI]
Genbank nucleotide accession
NC_044940.1 [NCBI]
CDS location
range 41887 -> 42537
strand +
CDS
ATGAGTTTGATTAACCTTCTGGTAAAGCGCGGCCCACAGCTTGGGTCGCTTCAGTTCGATGCTGTCCTGTCTGATGACCTTGACGCCAGCGTGGACATTGTGCAGTACCCCATTGAGACAGGTACGCCAATTGCGGACCACATCATTTATCAGCCTATTCGTTACACGATGACGGGTGCGGTATCGAACAACCCGCTGAAAGTCAGTATCACTGATTTTACCGGGGCATTGACAAATCTCGTCGATGATAATCCGTTTATTGCCGCAGGTGCTGGTCTGTTCGCGGGGTGGTTGAGCGGCTCAAATGAAACTCGCTCCAGTACGACACTGAACACTTTGCTTGATTTCATGTACTCCGGCCAGGTATTCACAGTGGACACGGGTGAAATCACGCTAAACAATATGGTCATTCAGCGTATCGGGCGCTCTAAAGACCCGGAGAATGAGAACGGACTGATATTTGTTGCTGAACTGCAGCAGATTGTCACACTTGACCGCGTGGCGAACGGTTCGCAACCGGCACAATATCAGCTGAACAGTAACGACGTTTCCAGCACATCCATATCCGGACTGATTGAGCGCGGTTACATCAATGTGAAGACAGCCGCAACGAATGTTGCCAGTCAGGTTACGACACTTTTGAATTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8cda10b6aebc25eb832a7c4027d56f16a00e4e99bc890a7212eba4777e842e4b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of phytopathogenic Pectobacterium atrosepticum bacteriophage Peat2 includes a CRISPR Cas4 nuclease Kalischuk,M., Hachey,J., Thomas,D. and Kawchuk,L. 2019-11-29 — GenBank