Protein

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UniProt accession
A0A222Z6E4 [UniProt]
Protein name
Rhamnogalacturonase A/B/Epimerase-like pectate lyase domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSPVYETYPAVDENNNFPPPIRLALAASPEISNFLLSDELVFSALRLGVTNDGVTDVTVALNAAAAEVYSKNPDAILFIPRGNYKISGPVTIRCQLEATQATFRYTGTGTALILGYEASKSVVTPRRRFNCPRVIKVDRTTGWDGTSVGIKAVNLNTCEIYTPFIQDFERGLVMYGYGGGNAYNTVNLGALWENHKNLVLDCTSDGYTNQNLFLGGRLQHSLTKGAVLDDINASQIYMVAENPEGGPNNNTFLNVSFEGENVAFYRVEMSGAYNQIINGRWEAPAGVNPRVRYRTNALRNRISGGYGSPGIIETFDGTLGGGSIDDTQGAYMAANTTLPAQVIPNDVTTTIKSFGPPVSRRIDYNSATGEFTPRPGRWLIGATVHYAINATGRRISSIVAAGSTICVDEKPGYQSRLGSQMVAPFRFNGQQSFVINTRQTSGSDVTLEGSSGYVRVWAEYLGV
Physico‐chemical
properties
protein length:463 AA
molecular weight: 50137,59750 Da
isoelectric point:6,04303
aromaticity:0,09719
hydropathy:-0,19870

Domains

Domains [InterPro]
DC_0445
STR
1–462
DC_0445
IPR011050
STR
28–266
IPR011050
IPR012334
STR
38–303
IPR012334
IPR024535
ENZ
43–93
IPR024535
A0A222Z6E4
1 463
Architecture
STR
STR 1-462 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A222Z6E4
1 463
Domain Start End Length (AA) Confidence
N-terminal 1 58 58 0,9779
Central domain 59 322 265 0,9893
C-terminal 323 463 140 0,9884
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-58
Central
59-322
C-terminal
323-463

Taxonomy

  Name Taxonomy ID Lineage
Phage Arthrobacter phage Correa
[NCBI] 		2024275 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
84d1ad2d7ae933decc5151fc4f6d00a82f62f3713bdeaaa9031ba94294bd022f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8454
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50