Protein

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Genbank accession
WJN66838.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MHRIDTPTAQKDKFGAGKNGFTRGNPQTGTPATELDDDYFDSLQEELSNVIELAGFNLNKNKNNQLVESINALIAKYSWSKNIVKVLSGGSFASCSISGIYQVSITDPASVSDFPNFAGAPLYNYGVMYVASDGGVISQTYISHIGQVAVRTKWSDQPQFKPWAVQYSAVCEPVTFKYGSPLIGSLIPWSRSQMPHEIWPDCGMEFIPWMAQSFDPLKYPLLHDLFPSNTLPVDMRGYTDRGWDNSRGIDPGRGLLSVQEDALQNVTGTFKCNSWRDGPVSATGALYNGGSESGGSPNNAANNAQVLGFDMSRAPGVRTSTETRMKNVAWNMIVRAK
Physico‐chemical
properties
protein length:337 AA
molecular weight: 36860,89340 Da
isoelectric point:5,84125
aromaticity:0,10386
hydropathy:-0,36617

Domains

Domains [InterPro]
DC_0310
STR
1–337
DC_0310
SSF88874
STR
178–336
SSF88874
IPR037053
ATT
182–241
IPR037053
WJN66838.1
1 337
Architecture
STR
ATT
STR
STR 1-181 | ATT 182-241 | STR 242-337
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage EPP-1
[NCBI] 		3056366 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Edwardsiella piscicida
[NCBI] 		1263550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJN66838.1 [NCBI]
Genbank nucleotide accession
OQ910326.1 [NCBI]
CDS location
range 17206 -> 18219
strand +
CDS
ATGCATCGCATAGACACACCTACCGCGCAGAAAGATAAATTCGGTGCGGGAAAGAACGGCTTTACCCGCGGTAATCCTCAGACCGGTACGCCTGCAACTGAGCTTGATGACGATTACTTTGACTCGCTGCAAGAGGAGCTTTCTAATGTAATTGAATTAGCTGGATTTAATCTAAATAAAAATAAAAACAATCAGTTAGTTGAATCTATAAATGCATTAATAGCTAAATACTCATGGTCAAAAAACATAGTTAAAGTTTTGTCTGGAGGATCTTTTGCTAGTTGCTCTATCTCAGGAATATATCAGGTATCCATCACAGACCCTGCGTCTGTATCTGATTTCCCTAATTTTGCTGGTGCTCCGCTTTATAACTATGGCGTGATGTATGTTGCTTCTGATGGTGGTGTAATATCACAAACATATATCTCACATATTGGGCAGGTAGCTGTTAGAACAAAGTGGAGTGACCAACCACAGTTTAAACCTTGGGCTGTCCAGTACAGCGCTGTTTGTGAGCCTGTAACATTTAAATATGGCTCTCCGCTTATTGGCTCTCTTATCCCATGGAGCCGTTCTCAAATGCCACATGAGATCTGGCCAGACTGTGGCATGGAGTTTATTCCGTGGATGGCACAATCTTTTGATCCATTAAAATACCCTCTATTGCATGATCTTTTTCCCAGTAACACACTTCCTGTTGATATGCGTGGATATACAGACCGCGGATGGGACAACAGTCGAGGCATCGACCCTGGAAGGGGATTACTGTCTGTTCAAGAGGACGCGCTGCAAAATGTAACTGGAACCTTTAAGTGTAATTCATGGCGCGATGGTCCTGTAAGTGCTACGGGTGCCCTTTATAATGGCGGGAGCGAGTCCGGTGGATCACCAAATAATGCAGCAAACAATGCGCAGGTTTTAGGGTTTGATATGTCTCGGGCTCCCGGTGTACGCACATCGACAGAAACACGAATGAAGAACGTTGCTTGGAACATGATTGTGAGGGCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
11d9906eaf90c06f8449928eadf647321952da882219ad534e81bcea41d0fef2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8199
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage EPP-1, a promising antibiotic alternative for the biocontrol of edwardsiellosis caused by Edwardsiella piscicida in aquaculture Han,G. 2024-01-18 — GenBank