Protein

View in Explore
Genbank accession
YP_010670578.1 [GenBank]
Protein name
minor tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAITKISELTELTTLTPNDFFIVNDENASTKSISYSNLATNIQQLLAITDLTFSGEITLAGGVSFTAAADLDGAVNINGSLNFAEGATINGIEVSDVDDIDLSTPATANQVLAYNAGSSTWVPTDTDALPERTGDLYYTFDNTTDPNPANGYIRFNSGSIGDATVLYISATDTFGVDLDSLIPRFFTTDQRLYVQQKTDATNFVVLTINAAGTDLGGYWSIPVSVIDSGAFPADESDVVMQFITDGVVKAPLTSPTLLGVPAAPTAVVGTDTTQIATTAFVNTAIAASVSGVTSVNGDTGAVTIDAADLGLGNVDNTADINKPVSVATQNALNLKADETALDDKADIPSYAITANGTSDYIFNGPGFDGTDFDPDIYLIRGRSYKFVNNMGAHPFQIQTEPGIGGATYGEGITNNGVSNGTLEWEVQMDCPDELYYQCTSHAGMSGRIFVMSNKTSQILDKNVPSSASDTGTIGEIRFGTQYLYVCTAANTWKRVEITTWT
Physico‐chemical
properties
protein length:501 AA
molecular weight: 52858,64390 Da
isoelectric point:4,05003
aromaticity:0,08583
hydropathy:-0,03054

Domains

Domains [InterPro]
DC_0286
ATT
1–40
DC_0286 DC_0856
IPR008972
STR
367–450
IPR008972
YP_010670578.1
1 501
Architecture
ATT
STR
ATT 1-40 | STR 240-499 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670578.1 [NCBI]
Genbank nucleotide accession
NC_070965 [NCBI]
CDS location
range 35710 -> 37215
strand -
CDS
TTGGCTATTACTAAAATCAGTGAGCTTACCGAGCTTACTACGCTGACTCCAAACGATTTCTTTATCGTCAACGACGAGAACGCTTCTACGAAGTCGATCAGCTACTCCAACCTGGCAACCAATATCCAGCAGCTGCTGGCTATTACTGACCTTACCTTTTCTGGAGAGATTACTCTTGCTGGTGGGGTGAGCTTTACTGCTGCTGCTGACCTGGACGGTGCTGTTAATATTAACGGTTCCCTTAACTTTGCCGAGGGTGCCACTATTAACGGTATTGAAGTCTCGGATGTTGACGACATCGACCTGAGCACTCCTGCCACAGCAAACCAGGTTCTGGCATATAACGCCGGTTCTTCTACTTGGGTTCCTACTGACACCGACGCCCTGCCCGAGCGCACCGGTGATCTTTACTACACCTTTGATAACACCACCGACCCCAACCCTGCGAACGGTTATATCCGTTTCAACTCAGGTTCTATCGGTGACGCCACTGTTCTTTATATAAGCGCAACTGATACGTTCGGTGTTGACCTGGACTCCCTGATTCCTCGTTTCTTTACCACCGACCAGCGTCTTTATGTTCAGCAGAAGACTGACGCAACCAACTTCGTCGTTCTTACTATCAACGCTGCTGGAACTGACCTTGGTGGTTACTGGTCTATTCCTGTTAGTGTTATTGACTCCGGTGCTTTCCCTGCCGACGAGTCTGACGTTGTTATGCAGTTCATCACAGACGGTGTGGTGAAGGCTCCCCTGACTTCTCCAACACTTCTCGGTGTTCCTGCTGCACCTACTGCTGTTGTCGGAACAGACACCACTCAGATCGCAACCACCGCTTTCGTTAATACTGCCATTGCCGCCAGTGTTAGTGGTGTTACTAGTGTTAATGGTGACACGGGTGCTGTTACTATTGACGCCGCTGACCTTGGTCTCGGTAATGTAGATAACACTGCTGATATCAACAAGCCTGTTTCTGTTGCCACTCAGAACGCTCTGAACCTCAAGGCTGACGAGACTGCACTTGACGATAAAGCAGACATTCCTTCCTACGCTATCACTGCAAACGGAACTAGTGACTATATCTTCAACGGTCCTGGTTTTGATGGAACTGACTTTGACCCCGATATCTATCTGATTCGCGGTAGGTCTTACAAGTTTGTAAATAACATGGGTGCTCACCCCTTCCAGATTCAAACTGAACCTGGTATTGGTGGTGCGACCTACGGTGAAGGTATTACCAATAACGGTGTTTCTAACGGAACACTTGAGTGGGAAGTTCAGATGGACTGTCCCGATGAACTCTACTACCAATGCACCAGTCACGCTGGAATGTCTGGTAGGATCTTTGTTATGTCTAATAAGACCTCTCAAATCCTAGACAAAAATGTTCCCTCTTCAGCGTCAGACACAGGAACTATTGGGGAAATTCGTTTCGGAACCCAATACCTCTATGTCTGCACAGCAGCGAACACCTGGAAACGTGTCGAAATCACAACCTGGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8476fa967536a2a1a514b610316c70593bfab150f04faf05e93c36529505b374
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8062
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank