Protein

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Genbank accession
AMO43632.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSITSITEAERIEIRDACLTAAQEMQQVVQSGAIPRSDIAEAVQPSLQAAADALGLVVDSTENQALRDDLANETDPALGAALIGYSGRTQADKNADVVSVRDKSANAGKPGATDDITAIRDAVNGGGAFLPDGTYPISSFVNVNAQQKVHLEGAGQGTVITKNAAATPTVLSSRNSDNTEVRDLRIDLTGANNATTGHAIALIDTDHATIRDMSISGFAGTGTGVISYCAVETDHTQHVRILDSQFDGDVAQSPNTNGFLITNGLYSRMSGLYAAGVGAYAIEYKNDQKYSHISDCVAVNSVNAYGYGQTTLDDTGVSYCTASNLISYNCGTGSVIGKGKYNITSNLLVSVDGGSTQTLKAGVRADGTANANSWVNCLFVGNITEPVRFGANTNFVSGTFHNTPTNMVQLTSGATRNVVEVQHPGPTRNSIFASSVISDTSGSGQTGANANVVFCPASGEYRGTFSGRWRFQHAPSGLAPASSNQKMVLESTGDTFYSVLTDGTGLVGLSAQSGSGTAQLAHSATSDYWQASGHTGGWFVRMANNLLRFGTDALASIGTVTNRMGDVFSLRFRPGAGAVIWTSGTGTPEGAVTAPVGSLYTRTDGGVGTTLYVKETGTGNTGWVAK
Physico‐chemical
properties
protein length:626 AA
molecular weight: 64883,71020 Da
isoelectric point:5,16009
aromaticity:0,06709
hydropathy:-0,15990

Domains

Domains [InterPro]
IPR012334
STR
75–585
IPR012334 DC_2009
IPR012334
STR
82–583
IPR012334
IPR011050
STR
96–395
IPR011050
AMO43632.1
1 626
Architecture
STR
RBD
STR 75-585 | RBD 586-626
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMO43632.1
1 626
Domain Start End Length (AA) Confidence
N-terminal 1 111 111 0,9677
Central domain 112 434 324 0,9855
C-terminal 435 626 191 0,9425
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-111
Central
112-434
C-terminal
435-626

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YMC11/06/C171_PPU_BP
[NCBI] 		1777063 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Kantovirus
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
9ab636227aec5593cf3b1e42bbcdd088ea2b38eea0ae89c53d0db5721516b925
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7319
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50