Protein

View in Explore

Genbank accession

XYS97521.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,90

Evidence RBPdetect2

Probability 0,93

Protein sequence

MAQEKKFRRGTTAEMAAFTGAEGELTVDTTKDTLIVHDATTVGGHALAKENLSNAPNFGGASAGSAGTAGKVPAPAAGDQNKALYGDGTWKTVDAAPTDAQIETAYNNRVAKVSGGEITAGTETTVRRYSPADIVAIVAAHETTGDVGPAGKSAYEVAVDEGFVGDETAWLASLVGADGPQGPIGAPGTDGTDGTNGTDGAAGADGQSAYALAVELGFVGDEAAWLASLVGPEGAEGPQGPAGNDGAPGTPGAAGADGEDGATGATGKSAYTSAVEGGFVGTEAEWIASLKGATGDQGIQGVKGDTGDAGADGATGATGADGKSAYQVAVDEGFVGDEAAWLASLVGPQGTAGADGDDGAPGAAGADGVDGRTILSGTTAPGAGLGNDGDFYIDTVAHNLYGPKTTGAWGSATSLVGPQGTAGADGTDGTDGVDGLMIRTGTGAPAGGLGNDGDFYIDTATHEIYGPKTTGAWGSATSLVGPAGSDGTDGTDGTNGTNGKTIITGTVAPTTEGVDGDIYINTATSTLYGPKTSGVWGAGTSLIGPQGTAGTNGQGVPTGGTVTQILVKNSSTDYDTAWANAPEVGVTSTDSSTVDFSGLGTSASALTASVKRSTTIAGNLITAETDGLSVSPLVTIIAESTTNRNILASDAYAKYIRFTNASAKTITAQPNATTAIPVGSVIVFINIGAGNLTITPGAAVTINKPSTQTFVLGQYASATLTKVGTDEWDLAGGMANA

Physico‐chemical properties

protein length:	737 AA
molecular weight:	71709,75860 Da
isoelectric point:	4,10931
aromaticity:	0,05427
hydropathy:	-0,14030

Domains

Domains [InterPro]

G3DSA:2.10.10.30
ATT
1–55

G3DSA:2.10.10.30 DC_1109 IPR008160 DC_1725 DC_1166

G3DSA:2.10.10.30
ATT
1–45

G3DSA:2.10.10.30 PTHR24637

IPR041352
ATT
6–38

IPR041352 DC_1725

DC_1725
STR
247–317

DC_1725

XYS97521.1

1 737

Architecture

ATT

STR

ATT 1-55 | ATT 90-206 | STR 207-413 | STR 506-737

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:2.10.10.30	ATT	G3DSA:2.10.10.30	1	55	Merged direct domain	G3DSA:2.10.10.30	N-terminal	Low	Positional only	20 proteins / 20 hits
G3DSA:2.10.10.30	ATT	G3DSA:2.10.10.30	1	45	Merged direct domain	G3DSA:2.10.10.30	N-terminal	Low	Positional only	20 proteins / 20 hits
IPR041352	ATT	DC_0533	6	38	InterPro cluster	Major tropism determinant, N-terminal domain	Central	Medium	Text match	295 proteins / 296 hits
DC_1109	ATT	DC_1109	90	206	Novel HMM	DC_1109	N-terminal	Low	Positional only	79 proteins / 79 hits
PTHR24637	Unmapped	-	176	480	PANTHER	COLLAGEN	-	-	-	-
DC_1725	STR	DC_1725	186	265	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
IPR008160	STR	DC_0536	231	267	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1725	STR	DC_1725	247	317	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_1725	STR	DC_1725	306	413	Novel HMM	DC_1725	Central	Low	Positional only	85 proteins / 85 hits
DC_1166	STR	DC_1166	506	737	Novel HMM	DC_1166	Central	Low	Positional only	45 proteins / 45 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Sinorhizobium phage Phosso [NCBI]	3435197	Viruses >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

XYS97521.1 [NCBI]

Genbank nucleotide accession

PV764938.1 [NCBI]

CDS location

range 265147 -> 267360
strand +

CDS

ATGGCTCAAGAAAAGAAATTCCGTCGCGGTACGACAGCTGAAATGGCTGCATTCACAGGTGCCGAAGGCGAACTTACTGTCGATACAACAAAAGATACTCTTATTGTCCATGACGCTACCACAGTTGGTGGTCACGCACTGGCAAAGGAAAATCTTTCGAATGCTCCCAATTTTGGTGGAGCTTCTGCTGGTTCTGCCGGAACCGCAGGTAAAGTCCCGGCTCCCGCTGCCGGTGATCAGAACAAGGCACTTTACGGTGATGGTACTTGGAAGACAGTTGATGCTGCTCCGACCGATGCCCAAATTGAAACAGCTTATAACAATCGAGTAGCAAAAGTATCCGGCGGTGAAATCACTGCTGGTACAGAAACTACTGTTCGTCGTTATTCTCCCGCAGACATTGTTGCAATTGTTGCCGCACACGAAACAACTGGTGATGTTGGTCCTGCCGGTAAATCCGCATATGAAGTTGCCGTAGATGAAGGCTTTGTTGGTGATGAAACTGCTTGGCTTGCTTCGCTTGTTGGCGCTGATGGTCCACAGGGGCCAATCGGTGCTCCAGGTACGGACGGAACAGACGGCACAAACGGAACAGACGGCGCTGCTGGTGCAGATGGTCAATCCGCATATGCTCTTGCAGTAGAGCTTGGTTTTGTTGGAGATGAGGCTGCATGGCTTGCAAGTCTTGTAGGTCCTGAAGGTGCTGAGGGTCCACAAGGCCCGGCTGGTAACGATGGTGCACCTGGCACTCCAGGTGCTGCTGGTGCTGACGGTGAAGATGGTGCTACTGGTGCCACAGGTAAGTCCGCATACACAAGCGCCGTAGAAGGTGGCTTCGTAGGTACTGAAGCAGAATGGATTGCTTCACTCAAGGGCGCAACTGGTGACCAAGGTATTCAGGGCGTTAAGGGTGACACTGGTGATGCTGGCGCAGACGGAGCAACAGGTGCTACCGGTGCTGATGGAAAGTCGGCGTATCAGGTTGCTGTTGATGAAGGATTCGTTGGTGACGAAGCAGCTTGGTTGGCCTCGCTCGTTGGTCCTCAAGGTACCGCAGGCGCAGATGGCGATGATGGTGCTCCAGGAGCGGCAGGAGCCGACGGCGTTGATGGTCGTACAATCCTAAGCGGTACAACCGCTCCTGGTGCGGGTCTAGGTAATGATGGTGATTTCTACATCGATACTGTCGCGCATAACCTGTATGGTCCTAAAACAACTGGAGCTTGGGGTTCTGCTACTTCGCTAGTAGGTCCACAGGGAACTGCTGGTGCAGATGGTACGGACGGAACTGATGGCGTTGATGGCTTGATGATTCGCACAGGCACAGGCGCACCCGCAGGTGGCCTCGGTAATGATGGCGACTTCTATATCGACACTGCAACTCATGAAATCTACGGCCCGAAGACAACAGGCGCTTGGGGCTCTGCAACATCGTTGGTCGGTCCTGCCGGCTCTGATGGTACTGACGGAACAGATGGTACAAACGGAACTAACGGCAAGACAATCATTACGGGAACTGTTGCTCCGACAACTGAAGGCGTAGATGGCGACATTTACATCAACACGGCAACAAGCACACTTTACGGTCCCAAGACTTCGGGTGTATGGGGTGCGGGAACTTCGTTGATTGGCCCTCAGGGCACAGCCGGCACGAACGGTCAGGGTGTTCCAACTGGTGGTACAGTAACACAGATCCTTGTGAAGAACTCGTCTACCGACTATGACACAGCTTGGGCAAATGCTCCGGAAGTCGGTGTAACAAGCACAGACTCCTCGACCGTTGATTTCTCTGGTCTTGGTACTTCTGCAAGCGCATTGACTGCAAGTGTAAAACGTTCCACAACAATTGCTGGTAACCTAATTACTGCGGAAACAGATGGTCTTTCGGTATCCCCGCTAGTAACGATCATCGCTGAATCCACAACAAACAGAAACATTCTTGCTTCGGATGCTTATGCAAAGTATATCCGTTTCACCAATGCTTCTGCTAAGACGATTACAGCTCAACCAAACGCTACAACAGCGATCCCAGTTGGCTCGGTTATTGTTTTCATAAATATCGGAGCAGGCAACTTGACGATTACGCCAGGTGCAGCCGTAACAATTAACAAACCATCGACACAGACTTTTGTGTTGGGTCAATACGCAAGCGCGACCCTGACAAAGGTTGGTACAGACGAATGGGATCTAGCAGGTGGCATGGCCAACGCATAA

Genome Context

Tertiary structure

PDB ID

bca434f7269ebb712cb2fbd0318bb834b10314719f855a5d48d0a6f35ea0480d

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6677

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence