Protein

View in Explore
Genbank accession
YP_011844060.1 [GenBank]
Protein name
tail length tape-measure protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMMGITKSIDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRVLSGTTRGFNDTTTSAGRASRALGNTSGSARGATRDFAAMAKVGGSLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPTNVGAVALSLSASEEGYNKALDMYKESLDKRNKLKTEFDKRMSQADASTAAAIRLVGEGMPVGLAAGGFEVGGVRIGSSEANKKFVEETAAMGLQVARLGKEVDDSTENLNAWKSAYQAAGAAAAKTNPEFQKQINLQKDMNDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTSNETKNQLEVQQKIAEVYNQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIENEIAKVQLERIKITNQDMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLKLELTIEKEKYAWYSRQAGKQKEAEQSRRAQAQINRELVEAEKQATATHVSALMDALEVSQTERNVTGQSQILTERLSISEKQLELSKDNTEEEIKYRNEIYKTSAALEQLKKQRDAQMQQQVGSSVGATYTPTTGLSGDDKKYADMQNQMASYDEAISKLGALNSQATEVGQSIGNLTNAMMQFSQGSLDTVSTVAAGMQMVSSMIAMGVSNQVSAIDQAIAAEQKRDGKSEASKAKLKKLEAEKVKIQQDAAKKQIIIQTAVAVMQAATAVPYPWSIPLMIAAGVAGALSLAQASSASGMSSIGDSGTDTAQYLSLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKSTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1235 AA
molecular weight: 132869,68790 Da
isoelectric point:5,76213
aromaticity:0,05020
hydropathy:-0,42842

Domains

Domains [InterPro]
IPR056207
TAS
1–81
IPR056207 DC_0073 IPR056208
Coil
Unmapped
586–613
Coil Coil Coil Coil
YP_011844060.1
1 1235
Architecture
TAS
STR
TAS
TAS 1-81 | STR 82-1197 | TAS 1198-1233 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB STyj5-1
[NCBI] 		2801510 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus STyj51
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011844060.1 [NCBI]
Genbank nucleotide accession
NC_103481 [NCBI]
CDS location
range 83242 -> 86949
strand -
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAATCTATTGAGAACGTTTCCGATGCGTTAGAAAATGCTGCTGCCGCTTCCGAACTGACTAATGAGCAGCTAGGAAAAATGCCCAAAACTCTTTACTCCATTGAGAGGGCAGCGGATAGAGCAGCTAAAAGCCTAACTAAAATGCAGGCTAGCAGAGGTATGATGGGTATCACCAAATCTATAGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATTGAGGTATCCGATAAGCTAGAGTCTGGATTTACACATGTTGGTAAATCTGTTAAGGCGATGGGTAACGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATACGATACAAACCGTGTTTTGTCGGGTACTACTAGAGGCTTCAATGATACTACCACATCCGCAGGTCGTGCTAGTCGTGCTCTAGGTAATACATCTGGTTCTGCACGTGGTGCTACTCGTGACTTCGCAGCAATGGCTAAAGTTGGTGGTTCTCTACCTCTTATGTATGCTGCTATCGCATCTAACGTGTTCGTTCTACAATCTGCATTCGAACAACTTAAGATGGGTGACCAGTTAAACCGTCTGGAGAAGTTCGGTACTATTGTAGGTACTCAAACAGGTACTCCGGTACAAACTCTAGCTAGATCTCTACAAGAGGCTGCTGGTTATGCAATCTCCTTCGAAGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAGGGTGTATCTAAACAAGAAATCGAACTTCTGGACGAACTTGGTGTTACTATTCGTCTTAATGATGCTTACGCTGATTACGTTAAACAGTTAAATGCTGCTAACACAGGTATCACATATAACGTCAATAGTCTTTCCACTTTCCAAAAGCAACAAGCATATGCTAACGCAGTAATTGCTGAATCTACTAAACGTTTCGGCTACTTGGATGACGTACTCCGTGCAACTCCATGGGAACAGTTTGCTGCTAACGCTGATGCTGCACTAAGAAAGGTTCAACAGGCTGCTGCTAAGTATTTAGGGCCGGTAATTGATTCTATTAACGCAGTATTCTATACTTCTCAAGCATCTATCTCGGCTTCTGCTGCTAGAGCACAAGAAGAAACTAACCGTCAGATTGACCCAACTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCCGAGGAAGGATATAATAAAGCTCTTGATATGTATAAAGAGTCTCTGGATAAGCGTAATAAACTAAAGACTGAGTTTGATAAACGTATGTCCCAAGCAGATGCTAGTACTGCTGCCGCTATTAGATTAGTGGGTGAGGGGATGCCTGTTGGATTAGCTGCTGGGGGATTTGAAGTAGGGGGAGTGCGCATAGGTTCTTCCGAAGCTAACAAAAAGTTTGTAGAAGAAACCGCAGCTATGGGACTACAGGTAGCAAGGTTAGGTAAAGAAGTTGATGACTCTACTGAAAACCTTAATGCTTGGAAATCTGCGTATCAAGCTGCTGGTGCTGCGGCTGCTAAGACTAATCCAGAATTTCAGAAGCAGATTAATCTGCAGAAGGATATGAATGACCCTGATGCGGTTTATGACTTTAACTCCGCAACTCTGAAAGGACTGACGGAACAGCAGAAAGCATATGATCAGGCTAAGAAAACTGCTAGTGATTTAGCTAACGATATACAGAACATCGCTCAGAATACTAATACTGCGGCTAAAACTAGTGCATCCCTATCAGATACGATTAAGACTATTGAGTCTCTATCTGCTGGTACTGGTAAAAATGCTGATGAGTATGTTAAGAGTCTGAACTTAGGGTATAATACTCTTAGTGAGATGAAGACTGCCTCACAAGCTCTTGCTGGTTATGTAAAATTAACTAGTAATGAGACTAAAAATCAGTTAGAAGTTCAGCAAAAGATTGCCGAAGTGTACAACCAGACCAAGGATAAAGAGAAAGCACAGGAAGCGGGTAGACGTCTAGAAATCCAACAGTTAGAAGAACAGGAAGCAGCCCTTAAGCGTGTCCTAGAAACTAACAAGGGTAACAAGGCAATTGAGAATGAAATAGCTAAGGTTCAGTTAGAACGTATCAAAATTACTAACCAGGACATGGAAGCTCAGAAGAAAGTTAAGGACTATACGGATAAGATTCTTGGTGTTGATCGTGAAATTGCTCTCCTGAATAACCGTACTATGACAGATACCCAGTATCGTTTAGCACAGTTAAAACTAGAACTGACTATTGAGAAAGAAAAGTATGCGTGGTACTCTAGACAAGCTGGTAAACAGAAAGAGGCTGAACAATCTAGGCGTGCTCAAGCACAGATAAATAGAGAACTCGTGGAAGCAGAGAAACAAGCTACCGCTACTCATGTATCAGCTCTCATGGATGCCTTAGAGGTTAGTCAAACTGAGAGAAATGTCACTGGCCAGTCTCAGATTCTTACTGAAAGGTTATCGATTTCAGAAAAGCAGTTAGAGTTATCCAAAGACAATACTGAAGAAGAAATTAAATATCGTAATGAGATTTATAAAACTTCAGCAGCCCTAGAACAGCTTAAAAAACAGAGAGATGCTCAGATGCAGCAACAGGTAGGTTCTTCTGTTGGAGCTACTTATACTCCTACGACTGGTTTATCCGGGGATGATAAGAAGTATGCTGATATGCAGAACCAGATGGCCTCTTACGACGAAGCTATTTCTAAGCTTGGAGCATTAAATAGCCAAGCAACGGAAGTTGGCCAGAGTATAGGCAATCTTACTAATGCCATGATGCAGTTCTCTCAGGGATCTTTAGATACTGTTAGCACTGTGGCAGCGGGTATGCAGATGGTTTCTTCAATGATCGCTATGGGAGTAAGTAATCAAGTATCCGCTATTGATCAGGCTATTGCAGCAGAGCAAAAACGTGACGGTAAATCCGAAGCATCTAAAGCTAAGCTCAAGAAACTGGAAGCGGAAAAGGTTAAGATCCAGCAGGATGCAGCTAAGAAGCAAATCATTATTCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCCTACCCCTGGTCTATTCCTCTTATGATTGCCGCAGGTGTTGCAGGTGCATTGTCTCTTGCACAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGAGACTCGGGTACTGATACAGCTCAATACTTGTCTCTTGGAGAGCGCCAGAAGAACGTGGACGTTTCTATGTCGGCTAACGCAGGAGAACTTTCTTATATTAGAGGAGATCAAGGGATTGGTAATGCGAACTCTTTCGTACCTCGTGCAGAAGGTGGTAATATGTACCCTGGAGTTAGTTACCAGATGGGTGAGCATGGTACCGAAGTAATCACTCCTATGGTTCCGATGAAGGCTACTCCTACTGATGAACTCAAAGGATCTTCAAAGAGTACATCGGGTAGACCTATTGTGCTGAACATCAGTACGATGGATGCGGCTAGCTTCCGAGACTTTGCTTCGAGTAACAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
baaf530760aa8859c8b2c06d9102a1af1f034276b3955c90b77edfa1d8375bf2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6501
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence and characterization of vB STyj5-1 Wang,J. and Jing,Y. 2017-08-18 — GenBank