Protein

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Genbank accession
XMR90338.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTSLPIPSEDPRDLKFNAGKFDEVMTSDAHYYVDRFGVKRWTIAGFQYTAEEAIRAYGYITMDSFEDGATLTLPNQTLRYEANGEYYRWDGEFPKVVPAGSTPDSTGEVKLGAWVSVGDAAFRQEANKKFKYSVKLSDYSTLQEAATAAVDGLLIDINYNFTDGESVDFGGKILTINCKAKFIGDGALIFNNMGPGSVINQPFMESKTTPWVIFPWDADGKWITDAALVAATLKQSKIEGYQPGVNDWVKFPGLEALLPQNVKDQHITATLDIRSASRVEIRNAGGLMAAYLFRSCHHCKVIDSDSIIGGKDGIITFENLSGDWGLGNYVIGGRVHYGSGSGVQFLRNNGGESHNGGVIGVTSWRAGESGFKTYQGSVGGGTARNYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGRGGYVSNVTVQDCAGAGMLAHTYNRVFSNITVIDCNYLNFDSDQIIIIGDCIVNGIRAAGIKPQPSNGLVISAPNSTISGLVGNVPADKILVGNLLDPVLGQSRVIGFNSDTAELALRINKLSATLDSGALRSHLNGYAGSGSAWTELTALSGSAPNAVSLKVNRGDYKTTELPISGTVLPDEGVLDINTMALYLDAGALWALIRLPDGSKTRMKLSV
Physico‐chemical
properties
protein length:676 AA
molecular weight: 72481,65120 Da
isoelectric point:5,01908
aromaticity:0,09024
hydropathy:-0,13003

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
63–119
G3DSA:2.10.10.80 IPR012332
G3DSA:2.10.10.80
ATT
63–125
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
64–123
IPR040775 IPR011050
IPR015331
RBD
129–674
IPR015331
XMR90338.1
1 676
Architecture
ATT
STR
ATT 63-125 | STR 126-676
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMR90338.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9919
Central domain 146 572 428 0,9826
C-terminal 573 676 103 0,8870
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-572
C-terminal
573-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BUCT_XGG_PSM_3377
[NCBI] 		3377958 No lineage information
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMR90338.1 [NCBI]
Genbank nucleotide accession
PQ465216.1 [NCBI]
CDS location
range 18082 -> 20112
strand -
CDS
ATGGCTACCACACCGACTAGCTTACCAATCCCGTCAGAAGACCCGCGCGACCTGAAGTTTAACGCTGGTAAATTTGATGAAGTCATGACATCTGATGCACATTACTATGTGGACAGATTTGGCGTAAAACGCTGGACTATTGCTGGATTCCAGTACACTGCGGAAGAGGCCATTCGTGCTTATGGATATATCACAATGGATAGCTTTGAAGATGGCGCGACGTTGACGCTTCCCAATCAGACACTGCGTTATGAAGCAAATGGAGAATATTATCGCTGGGATGGGGAGTTCCCCAAAGTAGTGCCAGCTGGTTCAACTCCAGATAGCACTGGTGAGGTTAAATTAGGAGCGTGGGTTAGTGTTGGTGATGCAGCATTTAGACAGGAAGCCAACAAAAAATTCAAATATTCAGTAAAATTATCAGATTATTCTACCTTGCAGGAAGCGGCAACAGCAGCCGTAGATGGATTGCTTATTGATATCAATTACAACTTCACAGATGGTGAGTCTGTAGATTTTGGTGGTAAGATTTTAACCATTAACTGTAAGGCTAAGTTTATTGGAGATGGGGCTTTAATCTTTAATAATATGGGGCCAGGCTCGGTAATTAATCAACCATTCATGGAGAGCAAGACTACTCCATGGGTCATTTTCCCGTGGGATGCTGATGGTAAATGGATTACAGATGCTGCCCTTGTTGCTGCAACGCTGAAGCAATCAAAGATTGAAGGCTATCAACCTGGGGTAAATGACTGGGTTAAATTCCCTGGATTAGAGGCATTACTCCCACAGAACGTTAAAGACCAACATATTACAGCCACTCTAGATATTCGCAGTGCCAGCCGAGTAGAAATAAGAAATGCTGGTGGTCTTATGGCTGCTTACCTTTTCCGTAGTTGTCATCACTGCAAGGTAATTGATTCAGATAGCATCATTGGTGGTAAAGATGGAATCATTACCTTTGAGAACCTTAGTGGTGATTGGGGATTAGGTAATTATGTTATTGGTGGACGTGTTCATTATGGTTCTGGTAGTGGTGTTCAGTTCCTGAGAAATAATGGTGGTGAATCCCACAATGGTGGAGTTATTGGTGTTACATCATGGCGAGCTGGTGAGTCTGGTTTCAAGACTTATCAGGGTTCCGTTGGTGGTGGTACTGCACGTAACTATAATCTACAGTTCAGGGATTCTGTTGCATTGTCTCCTGTTTGGGATGGTTTTGACTTGGGTTCTGACCCAGGTATGGCACCAGAACCGGATAGACCTGGGGATTTACCTGTATCTGAATATCCATTCCACCAACTGCCTAATAACCATTTGGTTGATAATATTCTTGTTATGAACTCACTTGGTGTTGGTTTAGGTATGGATGGTCGTGGTGGGTATGTTTCTAACGTTACCGTACAGGATTGTGCTGGTGCAGGTATGCTTGCACATACTTACAACCGTGTATTTTCTAACATTACAGTTATTGATTGTAACTACCTTAATTTTGATTCTGACCAAATTATCATTATAGGTGATTGTATTGTTAATGGGATTAGGGCTGCTGGGATTAAACCACAACCATCAAATGGTCTGGTTATCAGTGCACCAAACTCCACAATAAGTGGGTTGGTCGGTAATGTTCCTGCAGATAAAATTCTTGTTGGTAACTTACTTGACCCAGTATTAGGTCAGTCTAGAGTCATCGGGTTCAATAGTGATACTGCTGAGTTGGCTCTACGTATTAACAAGCTGTCAGCTACTCTGGATAGTGGTGCTTTACGTTCCCATCTGAACGGTTATGCTGGTTCTGGTTCAGCATGGACTGAGTTAACTGCACTCTCTGGTTCAGCCCCTAATGCTGTATCTCTCAAGGTTAACCGAGGAGATTATAAGACAACTGAGCTACCTATTTCTGGTACAGTATTACCGGATGAAGGTGTGTTGGATATTAATACAATGGCCTTGTACTTAGATGCGGGTGCACTGTGGGCTTTGATACGACTCCCTGATGGAAGTAAAACACGTATGAAGTTATCTGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd55e918f64b68a26ccd5638895c9ba76dcf8bc4670483cc6b7b78c202e024ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50