Protein

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Genbank accession

XWX51408.1 [GenBank]

Protein name

aphid transmission protein P5

RBP type

TSP

Evidence RBPdetect

Probability 0,84

Protein sequence

MNSIGRRNNRNANGNRTQRRRRRAVRTMVVVQPNRAGPRRRTGRRTGRRRPSSVLRPTGGSEVFVFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKIKPIRVEFKSHASATTAGAIFVELDTACKQSALASYINSFTISRTASKIFRSEAINGKEFQESTLDQFWLLYKANGTTTDTAGQFIITMSVNLMTAKXVDSSTPEPKPAPQPTPAPTPAPEPKPDPTPAPPPKRFFEYIGTPIGTISTRENTDSISVSKLGGQSMQYIENEKSETKVIDAFWNSNNNVSAQAAFIFPMPEGSYSVNISCEGLQSVDHIGGNEDGYWIGLIAYSNSTGDNWGVGNYKGCEFKNLLITNTWRPGHKDLKLNDCQFTDGQIVERDAVISFHVDATGNDASFYLMAPKTMKTDKYNYVVSYGGYTNKRMEFGTISVTCDESDVEATRIKRHSMTPARQNHLLVSEEYELPLDTIVDNGLYDLTPPEEEEFAPDEEDKQTVSTEPEAATAIRDYELATSEIPDADEGTLPTKEQLSSKPVDSQGVVLPRPRAKSPEILGTYQGVNIYPEDVPPVAREKLREAAKLPSTMLYDKTPKKSFLSRFIESNKSSLVSDAPSTTASSSGLKGDKLKEYTRIRRSLGQTAANEYRANNL

Physico‐chemical properties

protein length:	651 AA
molecular weight:	71822,57290 Da
isoelectric point:	8,45517
aromaticity:	0,07846
hydropathy:	-0,62631

Domains

Domains [InterPro]

IPR001517
ATT
20–33

IPR001517 IPR001517 IPR001517 IPR001517 IPR001517 IPR001517 IPR001517 IPR001517 IPR002929 IPR002929

IPR001517
ATT
60–200

IPR001517

IPR001517
ATT
62–199

IPR001517

XWX51408.1

1 651

Architecture

ATT

STR

ATT 20-33 | ATT 59-200 | STR 217-567 | STR 570-647 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR001517	ATT	DC_0492	20	33	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	59	77	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	60	200	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	62	199	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	77	94	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	94	111	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	111	130	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	130	149	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	158	179	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR001517	ATT	DC_0492	181	193	InterPro cluster	Luteovirus group 1 coat protein	N-terminal	Low	Positional only	1 proteins / 1 hits
IPR002929	STR	DC_0447	217	567	InterPro cluster	Potato leaf roll virus readthrough protein	Central	Low	Positional only	1 proteins / 1 hits
IPR002929	STR	DC_0447	570	647	InterPro cluster	Potato leaf roll virus readthrough protein	Central	Low	Positional only	1 proteins / 1 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XWX51408.1

1 651

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	549	549	0,2517
Central domain	550	640	92	0,8635
C-terminal	641	651	10	0,9848

Note: Constraints were applied during segmentation.
Fixed 350 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-549

Central
550-640

C-terminal
641-651

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Barley yellow dwarf virus-BEL [NCBI]	3443506	Viruses >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

XWX51408.1 [NCBI]

Genbank nucleotide accession

PV805049 [NCBI]

CDS location

range 2924 -> 4879
strand +

CDS

ATGAATTCTATAGGCCGTAGAAATAACCGAAACGCAAATGGCAACAGAACCCAACGGCGGCGCCGTAGAGCAGTTCGGACAATGGTTGTGGTCCAACCCAATCGAGCAGGACCCAGACGACGAACTGGTCGACGCACAGGAAGAAGAAGGCCAAGTTCTGTACTTAGACCAACAGGCGGGTCTGAGGTATTCGTATTCTCAGTCGACAACCTTAAAGCCAACTCTTCCGGGACAATCAAATTCGGCCCCAGTCTATCGCAATGCCCAGCGCTTTCAGACGGAATACTTAAGTCCTACCATCGTTACAAGATCAAACCTATCCGTGTTGAGTTTAAGTCACACGCGTCCGCCACTACGGCCGGCGCTATCTTTGTTGAACTCGACACCGCGTGCAAACAATCAGCCTTGGCTAGCTACATTAATTCCTTCACCATCAGCAGGACCGCCTCAAAGATCTTCAGGTCAGAGGCAATTAATGGGAAGGAATTCCAGGAATCCACGCTAGACCAATTTTGGCTCTTGTACAAGGCAAATGGCACGACTACTGACACCGCTGGCCAATTCATCATAACCATGAGTGTCAATCTAATGACTGCCAAATAGGTAGACTCCTCAACACCGGAACCCAAACCCGCACCGCAACCTACCCCAGCACCAACCCCAGCCCCAGAACCCAAACCAGACCCAACACCAGCTCCACCCCCCAAGAGATTCTTCGAGTACATTGGAACCCCAATTGGCACAATTTCAACTCGTGAGAACACCGACAGCATTTCTGTCAGCAAGCTTGGAGGGCAATCTATGCAATATATTGAAAATGAGAAAAGTGAAACCAAGGTTATTGATGCCTTTTGGAATTCAAACAACAATGTCTCCGCCCAGGCGGCATTCATATTTCCAATGCCAGAAGGCTCATACAGTGTCAATATATCATGCGAAGGTCTGCAATCCGTCGATCATATCGGCGGAAATGAAGATGGATACTGGATAGGACTCATCGCCTATTCAAACTCCACAGGGGACAATTGGGGGGTTGGTAACTACAAAGGGTGCGAGTTCAAGAACCTACTAATCACAAACACTTGGAGACCAGGCCATAAGGATCTCAAGTTAAATGATTGTCAATTCACAGATGGACAAATAGTTGAAAGGGATGCCGTAATATCATTCCATGTAGATGCAACAGGCAATGACGCCAGCTTCTACCTCATGGCACCCAAAACAATGAAAACTGACAAATACAACTATGTTGTCTCATATGGTGGCTACACGAACAAAAGGATGGAGTTCGGCACCATATCCGTAACCTGTGATGAATCCGATGTTGAGGCAACCCGTATCAAGAGGCACTCAATGACACCAGCACGACAAAACCACCTACTAGTTTCCGAAGAATATGAACTCCCGTTGGACACCATCGTTGACAACGGGCTATATGATCTCACGCCCCCCGAGGAAGAAGAGTTCGCTCCGGACGAAGAGGACAAACAGACCGTTTCAACAGAACCTGAAGCTGCCACTGCTATCAGAGACTATGAGCTTGCAACCTCAGAAATCCCTGATGCAGATGAAGGCACCCTACCCACAAAGGAACAGTTGTCCTCCAAACCCGTTGACTCCCAAGGAGTTGTGCTTCCCCGACCGCGTGCCAAATCACCGGAAATTTTAGGCACATATCAAGGTGTCAATATATATCCAGAAGATGTACCGCCAGTAGCCAGGGAGAAACTACGTGAGGCAGCAAAACTGCCCAGCACCATGCTATATGACAAAACTCCCAAGAAGTCATTTTTATCGCGTTTCATAGAGTCTAACAAATCTAGTTTAGTTAGCGACGCCCCTAGCACCACTGCCAGCAGCAGTGGTTTGAAGGGCGATAAGCTTAAAGAGTATACCCGCATTAGGAGATCCCTAGGCCAGACCGCAGCCAATGAATATCGCGCGAACAACTTGTGA

Genome Context

Tertiary structure

PDB ID

2ab754874ee23a1e7fc1d1bcf5c7d7ea0f57cbab62de44c06be6ad95cb046be8

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7354

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Identification of a novel luteovirus in rough bluegrass (Poa trivialis L.) in Belgium	Maclot,F., Lessire,M., Onder,S. and Massart,S.	2021-06	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature