Protein

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Genbank accession
QXV78436.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVMPSRVVFCLANNNLRRSLMALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGVAPLVHLINRDSVEQYYVVFTGQAVRVFDLNGKEYTVNGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVRADKTPLYTLKENGDCLINVRGGQYGRTLALTINNVRIEYKIAQGDKPEHVQETDAQWLVKKLADLARAHGSFKDWQFNEGSGFIHVIAPGNSQIDQLSTEDGYANQLMNAVMHTSQSFSKLPIEAPNGYTVKIVGDTSKTSDMFYVQYDNVKKVWKEVAGWGVEKGLDGSTMPHALVRQSDGSFVMQVLPWAQRACGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSASGVLSPKSVELNLTTEFDVSDRARPFGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSANAPSKIFLYKFLYLNDEIAQQSWSHWELGSNVTVLACDSIGSTMYLVLRNQTHTWMCRAHFTKNSIDFPDEPYRLYIDNKVKYVIPKGAYNDDTYTTTVKPVDIYGMKYWKGKIYIVASDGLVSWFEPPRGGWPNGTPVLSMSGNREGETIYVGLAIDFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFVVEVENTSRLFSYDMAGARLGSNALRAGGLNVGTGQFRFPVAGNAQLNEVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:812 AA
molecular weight: 90467,22550 Da
isoelectric point:6,66536
aromaticity:0,10837
hydropathy:-0,23978

Domains

Domains [InterPro]
IPR058003
TTP
21–812
IPR058003
QXV78436.1
1 812
Architecture
TTP
TTP 21-812
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV78436.1
1 812
Domain Start End Length (AA) Confidence
N-terminal 1 159 159 0,9955
Central domain 160 364 206 0,1337
C-terminal 365 812 447 0,2151
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-159
Central
160-364
C-terminal
365-812

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ErnstBeyeler
[NCBI] 		2852038 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV78436.1 [NCBI]
Genbank nucleotide accession
MZ501064 [NCBI]
CDS location
range 27520 -> 29958
strand +
CDS
ATGGTGATGCCTTCACGGGTGGTCTTCTGTCTCGCTAACAACAACTTAAGGAGGTCTCTAATGGCTCTTATTTCACAATCCGTCAAGAACCTAAAAGGCGGTATCAGTCAACAGCCTAACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGCTGGTCATCCGAGACCGAGGGCTTACAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTGTAGCGCCCCTCGTTCACTTAATCAACCGAGATAGCGTAGAACAGTATTACGTTGTGTTCACGGGACAGGCAGTCCGGGTGTTCGACCTCAACGGCAAAGAGTATACCGTGAATGGTGACTTGAGCTACGTGAAGGTAGGGAACCCACGCGATGACCTTCGAATGGTGACGGTTGCTGACTACACGTTTATCGTTAACCGCAACATGGTGGTTCGTGCCGATAAGACACCGCTCTATACTCTGAAAGAGAACGGAGACTGTTTGATTAACGTTCGTGGCGGACAGTATGGGAGAACGCTTGCACTCACAATAAACAACGTCCGCATTGAGTACAAGATTGCACAAGGTGATAAGCCTGAACATGTACAAGAGACTGATGCTCAATGGCTCGTTAAGAAACTGGCTGACCTTGCCCGTGCCCATGGTTCCTTCAAGGATTGGCAGTTCAACGAAGGGTCTGGCTTCATCCACGTAATCGCTCCGGGCAACAGTCAGATTGACCAGTTGTCCACTGAGGATGGCTATGCTAACCAGTTGATGAATGCTGTTATGCATACAAGCCAGTCATTCAGTAAGTTGCCAATCGAGGCTCCTAATGGATACACTGTGAAGATTGTTGGTGACACCTCTAAGACTTCCGATATGTTCTATGTCCAATATGACAACGTTAAGAAAGTCTGGAAGGAGGTTGCAGGTTGGGGCGTTGAGAAGGGACTTGATGGCAGCACTATGCCACACGCTTTGGTTCGCCAGTCAGACGGCTCATTCGTTATGCAGGTTCTACCGTGGGCGCAACGCGCTTGTGGTGACATGGACACTAACCCCACTCCCTCCATTGTGGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCCCGTACCTCCAAATATTTCTCACTGTTCCCTGCGTCAGTGGCTAACCTGTCAGATGATGACCCGATTGATGTGGCTGTATCCCACAACCGTATCTCAATCCTGAAGTATGCCGTACCGTTCTCCGAAGAGTTGCTGCTATGGTCTGACCAAGCACAGTTCGTTCTATCTGCCTCTGGTGTCCTCTCACCGAAGTCTGTAGAGTTGAACCTTACGACTGAGTTCGATGTATCAGACCGAGCGCGTCCTTTCGGTGTTGGGCGTGGTGTCTACTTTGCGTCACCTCGTGCTTCCTATACGTCACTCAACCGTTACTATGCGGTACAGGACGTTAGCTCTGTGAAGTCCGCTGAGGATATGAGTGCTCACGTTCCTAGCTACATCCCGAACGGTGTGTTCTCCATTCGTGGCTCCGGTACTGAGAACTTTATCTCCGTGCTGTCTGCTAACGCTCCTAGTAAAATCTTCCTCTACAAATTCCTGTACCTAAACGATGAGATTGCTCAACAGTCATGGTCCCATTGGGAACTTGGGAGTAACGTAACAGTTCTGGCATGTGACTCCATCGGGTCCACTATGTACCTTGTGTTGCGCAACCAGACACACACTTGGATGTGCCGTGCTCACTTCACGAAGAACAGTATTGACTTCCCTGATGAACCTTACCGTCTGTACATTGACAACAAAGTGAAGTACGTGATTCCTAAAGGTGCCTACAATGACGATACTTACACGACCACTGTTAAGCCTGTGGACATCTACGGGATGAAATACTGGAAAGGTAAGATCTACATTGTGGCCTCTGATGGTTTAGTCTCGTGGTTCGAACCACCCCGTGGTGGCTGGCCTAACGGTACTCCTGTGTTGTCAATGAGTGGGAACCGAGAGGGTGAGACTATTTACGTTGGGTTGGCTATAGACTTCCGTTATGTGTTCTCTAAGTTCCTCATCAAGAAGACCGCCGATGATGGCTCAACAGCTACCGAGGACATTGGTCGCTTGCAGCTTCGCCGTGCGTGGGTGAACTATGAGGACTCTGGTGCATTCGTTGTCGAGGTAGAGAACACCTCTCGCCTATTCAGTTATGACATGGCGGGTGCCCGTTTGGGTTCCAATGCGTTACGTGCTGGTGGGCTTAACGTTGGTACAGGTCAGTTCCGATTCCCGGTTGCTGGCAACGCACAGTTGAATGAGGTCCGTATTATCTCCGACCACACTACTCCGTTGAACGTTATCGGCTGTGGGTGGGAAGGTAACTACCTGCGTCGTTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
929eb559390bd02f093d9933820e59b2747c357d458072a16d87bf7757f7746c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3217
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank