Protein

View in Explore
Genbank accession
QBI78556.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIQRGSNANGEFVRFADGTQICIVTLLGDGSQQPGTSISLPLPAAFLGNWTTGVSVSWASHVSNPSVANGLKVAYANGSTLFFILQDALATNRLIFTLVGRWF
Physico‐chemical
properties
protein length:103 AA
molecular weight: 10931,30400 Da
isoelectric point:7,97753
aromaticity:0,10680
hydropathy:0,33883

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_BR213a
[NCBI] 		2563515 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI78556.1 [NCBI]
Genbank nucleotide accession
MK510986.1 [NCBI]
CDS location
range 19368 -> 19679
strand +
CDS
GTGATCCAGCGGGGTAGTAATGCGAACGGTGAGTTCGTGCGGTTCGCTGATGGAACGCAAATATGCATAGTCACGTTGTTGGGCGACGGTAGTCAGCAGCCAGGTACGTCTATATCACTGCCCCTGCCGGCTGCATTTCTGGGTAATTGGACCACCGGTGTCAGCGTGAGTTGGGCGTCGCATGTGAGCAACCCTTCTGTGGCAAACGGGCTGAAAGTTGCCTATGCAAACGGCTCGACATTGTTCTTCATCCTTCAGGACGCACTGGCCACCAATCGTTTGATTTTCACTTTGGTAGGGAGATGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d29fbff81f14af11e150b2b8c0a1f81e3b86bf497f0457b55aa57055c9753334
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank