Protein

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Genbank accession
QBX30474.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKLMTSINQIEGGDVLKSGDITSVFGFEILGYDGKHMNLSGTGKLTLSNDETVALYQDVTVENGHFTFVIGDVVEPGTYYLEIKLNGHIFPSNNFKVKVKSSLNIDGAIPSKKDPKLKLLADELRESGLISGGTDTTEDLVNVYNLAKI
Physico‐chemical
properties
protein length:150 AA
molecular weight: 16254,27650 Da
isoelectric point:4,97417
aromaticity:0,07333
hydropathy:-0,11067

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan536
[NCBI] 		2548249 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus salivarius JIM8777
[NCBI] 		347253 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus salivarius

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX30474.1 [NCBI]
Genbank nucleotide accession
MK448980.1 [NCBI]
CDS location
range 38317 -> 38769
strand +
CDS
ATGGCTAAACTCATGACCTCTATCAACCAAATCGAGGGTGGTGATGTTCTCAAATCTGGGGACATCACTTCCGTCTTTGGTTTTGAAATTTTGGGTTACGATGGAAAACACATGAATCTGTCCGGCACTGGTAAGCTAACGCTTTCCAATGACGAAACCGTGGCACTCTATCAAGATGTTACCGTTGAAAATGGGCATTTTACCTTCGTCATAGGTGATGTCGTAGAGCCTGGCACATACTACCTAGAGATTAAACTGAATGGGCATATCTTCCCGTCTAACAATTTCAAGGTAAAAGTCAAGAGCTCACTAAATATTGACGGTGCGATTCCATCAAAAAAAGACCCTAAACTAAAACTACTAGCGGATGAATTGCGAGAGTCCGGGTTAATCAGTGGTGGCACTGATACCACTGAAGACCTCGTTAATGTCTACAATCTAGCCAAAATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb3279ef223b07700576cf2ed3a5da224fa76a44c09b463760d854c008ed50a0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6318
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank