Protein

View in Explore
Genbank accession
QZI86098.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MVRLTLHQYKEPRMQAITRTNTPVLFELAQPSITLKVEDLSNLNHPVNIKALSGKREGMACMVGGVIYKSTGSNPSDVWERAAATKLSNSILRSVDNPEDNVCDGISTLEPAKAVLLPVEDGLLGDWLLDTQTATVTYQGVGGAMEFICSGDVSTIETVNWGNNITVELYDDTAGDGLTGATKVYPITRRQGLVSSIDFTLVGYGYVNNGDIFSLRVGSNIVGDFNVNNVLWAIKPLL
Physico‐chemical
properties
protein length:238 AA
molecular weight: 25723,90640 Da
isoelectric point:4,76023
aromaticity:0,06723
hydropathy:-0,01176

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86098.1
1 238
Domain Start End Length (AA) Confidence
N-terminal 1 78 78 0,9565
Central domain 79 227 150 0,0026
C-terminal 228 238 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-78
Central
79-227
C-terminal
228-238

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 15E36.1
[NCBI] 		2859290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86098.1 [NCBI]
Genbank nucleotide accession
MW865291 [NCBI]
CDS location
range 2664 -> 3380
strand +
CDS
ATGGTGCGACTAACATTACACCAGTATAAGGAACCTCGTATGCAAGCCATAACACGTACTAATACACCAGTGCTATTTGAGCTGGCACAGCCCTCCATTACATTAAAAGTAGAGGACTTAAGTAATTTAAACCACCCAGTAAATATCAAAGCCCTATCTGGTAAGCGTGAAGGTATGGCTTGTATGGTTGGTGGTGTTATCTATAAATCTACAGGTTCTAACCCATCTGATGTGTGGGAGAGAGCGGCTGCAACTAAATTATCAAACTCTATCCTACGCTCCGTAGATAACCCCGAAGATAATGTGTGTGATGGAATAAGCACTCTTGAACCTGCTAAGGCAGTGTTACTTCCCGTGGAAGATGGGCTCTTAGGTGATTGGCTACTTGACACCCAAACAGCTACTGTAACCTATCAAGGGGTTGGAGGTGCGATGGAGTTCATTTGCAGTGGTGATGTTAGTACAATAGAGACTGTCAATTGGGGTAATAATATCACTGTTGAACTCTATGATGACACAGCAGGTGATGGGCTTACGGGTGCAACTAAGGTTTACCCTATAACAAGGCGACAGGGTCTAGTTTCTTCTATTGACTTTACTCTTGTAGGTTACGGCTACGTAAATAACGGGGATATTTTCTCATTGCGAGTAGGCTCTAATATCGTAGGTGACTTTAATGTAAACAATGTCCTCTGGGCTATCAAGCCTTTACTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
65974a312d61785522f084b28c11d9582ea1d9540dcc872955319b7c1d5e2860
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6855
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank