Protein

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Genbank accession
YP_010672112.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTVEVASFISDLEITYPRQGDLIKEGDDHIRMIKRVLQQTFAGFNSFVTMSSASMNNLDKNFKFASDSTDIDGSVLFNGTQKTINFNKGGVLVNRNIVTGVPLPRDGAIGLNDAVNRDYLENKGGATRAAWPVGSIYISATDTNPAATLGFGTWSAFAPGRVLMGVGVGNDGSDTVNIQNPLVTGGRYYHTLTVGEMPAHAHGHDIGGTAVSAGAHNHEYAGDDNLPNFWGIAQNQAARYDADSDSDQWARKYFTSTNGAHEHALRITGGVQSTGGNQKHNNIQPYITVYMWRRMS
Physico‐chemical
properties
protein length:296 AA
molecular weight: 31990,03200 Da
isoelectric point:6,03206
aromaticity:0,09122
hydropathy:-0,38547

Domains

Domains [InterPro]
DC_0033
STR
6–296
DC_0033
SSF88874
STR
129–294
SSF88874
IPR053827
ATT
129–295
IPR053827
YP_010672112.1
1 296
Architecture
STR
ATT
STR 6-128 | ATT 129-296
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010672112.1
1 296
Domain Start End Length (AA) Confidence
N-terminal 1 75 75 0,9679
Central domain 76 274 200 0,0471
C-terminal 275 296 21 0,9985
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-75
Central
76-274
C-terminal
275-296

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE131
[NCBI] 		2081631 Uroviricota > Caudoviricetes > Grimontviridae > Moazamivirus SE131 >
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010672112.1 [NCBI]
Genbank nucleotide accession
NC_070974.1 [NCBI]
CDS location
range 72971 -> 73861
strand -
CDS
ATGACGGTAGAAGTCGCATCGTTTATCTCTGACTTAGAGATTACATATCCCCGTCAAGGTGACTTGATTAAAGAGGGTGACGACCACATTCGTATGATTAAACGAGTGTTGCAACAAACCTTTGCGGGATTTAATAGTTTTGTAACAATGTCCTCTGCATCCATGAATAACTTGGATAAGAATTTTAAATTCGCATCTGATTCAACGGATATTGATGGTTCAGTACTTTTTAATGGTACTCAAAAGACAATCAACTTCAACAAAGGCGGTGTTCTGGTTAACAGAAACATCGTAACAGGTGTTCCACTTCCTCGTGACGGTGCTATTGGTCTTAATGACGCTGTTAACCGAGATTACTTGGAAAACAAAGGTGGTGCAACTCGTGCAGCTTGGCCTGTAGGTTCAATCTACATTTCAGCCACAGATACAAACCCAGCAGCAACCCTTGGTTTTGGTACTTGGTCAGCGTTTGCACCTGGTCGTGTATTGATGGGTGTTGGTGTTGGTAATGACGGCTCTGATACTGTAAATATTCAAAACCCTCTTGTTACTGGTGGTAGATACTATCACACACTAACTGTTGGTGAAATGCCTGCTCACGCACATGGTCACGATATTGGTGGTACAGCAGTTTCTGCTGGTGCTCACAACCATGAATATGCTGGTGATGATAACTTGCCTAACTTCTGGGGTATTGCTCAGAACCAAGCAGCTCGTTATGATGCAGATTCTGACTCAGACCAATGGGCTCGTAAATACTTTACCTCAACTAATGGTGCTCACGAACACGCATTGAGAATTACAGGTGGTGTTCAATCTACTGGTGGTAACCAAAAACATAACAACATTCAGCCTTATATTACCGTATACATGTGGCGTAGAATGTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c055e8f501984e9e4c4253290a7fc99cc3682c9836188765dfac660c2104fb90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6783
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft Genome Sequence of Salmonella Enteritidis Phage SE131 Kim,Y., Han,B.K., Kim,H. and Kim,D. 2012-07-15 — GenBank