Protein

View in Explore
Genbank accession
UPW37965.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MERFMAEFGQNYVQIPVLSENNAVRYKLSIAGSCTKSTVKAYVKFQDEVFGPQNFLPGLNLVEIDPVTNTITASKNYQLTSSHDTISQAFITYVNSIPANRIVCLISSGRLFASQTLIDWFKAAGSTVFPDKWLIDKVEPSYSAFYVSGRNAIVKEHVLYNDGILVEDVSTPLEMVYDTINDVGATGFPLRIIEDETEYFSSGSQEIKRFPTSETITPMANYNMKPGDWFYIKFQSNYDAALKAEGTTQVSVRFFNGLSLIQSTDMDIPVGAGSPPAGAWMSFERYIQAPANSDGFTVYARKTVNVGIGGLRNISFGEISSQEPQPKDAEIGVNGMRMNFGTETLNLAPDLISQLNDKASGYAGKVFAAEFKEKY
Physico‐chemical
properties
protein length:375 AA
molecular weight: 41434,23050 Da
isoelectric point:4,89960
aromaticity:0,11733
hydropathy:-0,17040

Domains

Domains [InterPro]
DC_0912
STR
1–375
DC_0912
PS52031
LEC
22–192
PS52031
IPR039477
STR
58–127
IPR039477
UPW37965.1
1 375
Architecture
STR
STR 1-375
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW37965.1
1 375
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,6018
Central domain 176 364 190 0,6324
C-terminal 365 375 10 0,2719
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-364
C-terminal
365-375

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO10
[NCBI] 		2918865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW37965.1 [NCBI]
Genbank nucleotide accession
OM386655 [NCBI]
CDS location
range 142420 -> 143547
strand +
CDS
ATGGAAAGATTTATGGCTGAATTTGGACAAAACTATGTTCAAATTCCTGTATTATCTGAAAATAACGCCGTTCGATATAAACTTAGTATAGCAGGGAGCTGTACTAAGTCTACCGTAAAGGCTTATGTTAAATTTCAAGATGAGGTCTTCGGACCTCAAAACTTTTTACCAGGGCTTAATCTTGTTGAAATAGACCCTGTAACTAACACAATAACGGCCTCTAAGAATTACCAGCTTACAAGTTCCCATGATACTATATCTCAAGCCTTTATAACATATGTGAACTCTATTCCGGCCAACAGAATAGTTTGCTTAATTTCCTCCGGAAGGCTATTTGCTTCACAGACATTAATAGATTGGTTTAAGGCTGCTGGAAGTACGGTATTTCCGGATAAATGGCTTATTGATAAAGTAGAACCAAGTTATTCGGCTTTTTATGTTTCGGGTCGAAATGCTATAGTAAAAGAGCATGTGCTTTATAACGATGGCATTTTGGTTGAAGATGTATCAACCCCTTTAGAAATGGTTTATGACACTATTAATGATGTAGGAGCCACAGGATTCCCACTTCGTATTATAGAAGATGAAACCGAATACTTTAGTAGCGGAAGCCAAGAAATTAAACGTTTCCCTACTTCAGAGACCATAACTCCTATGGCAAATTATAATATGAAACCTGGTGATTGGTTTTATATTAAATTCCAAAGTAATTATGATGCTGCATTGAAGGCTGAAGGAACAACCCAAGTTTCAGTTAGGTTCTTTAATGGGCTTTCATTAATCCAGTCCACTGATATGGATATTCCTGTGGGCGCCGGTTCTCCTCCAGCAGGAGCATGGATGAGTTTTGAGCGTTATATTCAAGCCCCAGCAAATTCTGACGGATTCACAGTTTATGCTCGTAAAACGGTAAATGTGGGTATTGGCGGTCTTAGAAATATATCATTCGGTGAAATATCCTCGCAAGAACCTCAACCTAAAGATGCTGAAATCGGTGTGAATGGTATGCGTATGAACTTTGGTACAGAAACACTTAACTTGGCTCCTGATTTGATTTCTCAGTTGAATGATAAAGCTAGTGGTTATGCAGGCAAGGTATTTGCTGCAGAGTTTAAAGAAAAATATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a6b16ab4ccf27e5195ebc0a070b3bbe3d86a0e0fa3c3e6aa54c9e8b4805cb914
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7008
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank