Protein

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Genbank accession
GENB_a28777e7a752 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSTLRVDTLQKPDNSVTVNLEDIITEVNLGDTTSPTKGAGLVGFSSSVSYPDGTVGAEILEVSSKIGVTVKDYGAVGDGVTDDTVAIQAAITAVGQYKDLGWPRGTYLITKKLVMPTGQRWVGAGGQRGATIKKGANIDMVEVGTLCTVLDISLEGEGATYSGKGFVIESGFSQNLVRCRAVNMGGEPLYFANNAGGGANVTAFEGYPVDTGTYAGCAIAGDTSPHPRFFRGMWLSGANFALGPGAGNGGSMTQFYIRDLRFDPTSTLFHISNGRCATLGATTTLKGFDHSIDGVAFAGPVALDSAQGINLGPSCSVPSLTENATNSQYNSVYVQRRTYTPTWTQTSATPAIGNGTLTGNYVRAGHMCHVQIELVAGSTTTFGDAASGYRFSLPFRGHLSFNQRGFPVRIYDTSASADFTGWASIGAGQDYITISVGAQQVRSTSPMTWATGDTLHCSFSYMTR
Physico‐chemical
properties
protein length:464 AA
molecular weight: 48667,79060 Da
isoelectric point:5,81442
aromaticity:0,09267
hydropathy:-0,07716

Domains

Domains [InterPro]
IPR012334
STR
57–390
IPR012334 DC_1128
IPR012334
STR
65–395
IPR012334
IPR011050
STR
68–321
IPR011050
IPR024535
ENZ
69–143
IPR024535
GENB_a28777e7a752
1 464
Architecture
STR
RBD
STR 57-395 | RBD 396-464
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_a28777e7a752
1 464
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,9753
Central domain 85 324 241 0,9870
C-terminal 325 464 139 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-324
C-terminal
325-464

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA11
[NCBI] 		347327 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
51f9c1ddb6bf70f451286ae90a980007c02449b50d9419d7ea124578cbcd75aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8337
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50