Protein

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UniProt accession
M1U9F0 [UniProt]
Protein name
Structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANRIQLRRGGAQEWANENPTLAQGEIGIELDTNRFKIGDGVRGWNTLPYERPIESVANTANTLVTRDADGNFSAGAITATLIGNSATSSRLANPRQIQLSQDLSGSGTFDGSSNLSLNAQLQVLSSLPHYDGTTTSTGTYTKVIVDAKGRITNASQPSSYVDLGLNDVQPLDSDLSAIANLTSTGIITRNAGGSALTRSVQGSSGRISVVNGNAVAGNPTIDLIDTTVALEAEFIAGSGQYNIPSLTSVGGDNLPEAANRTVNSTRYTVDQYGRFTSALTIPIATAREGSKYPNYDAATTYSRYAIIQNASKVYQALTTINAGAGAPTHSSGDTGSWRYLAAEATEQKGLASFAQEDFDVDSNGHVTIAAAGVDNTQLQNNLLRFADGNATEDFELDNELTSTTGYRGFNKLNYVKVNDTSGNLLVGLNNTGDGGAGELDVNVRSYFSDPDVTFDGAVQQAINKTGDGDFQILHQQNTASARTFAIAAQNSGSGNSQVAISAENVVSIDATDSAGKVHIEDLRIQDNYLASTGQLNLDPGDDRTNAGLVRIFGDLQIDGTTTTVNSTTMTVDDVTILLGGDTAPASDDNLDRGIEFRYYDTQARLGFYGWDTSYTDLSGHEGGYRFLHAATNTGEVFAGTDSGIIAGNLKLTTNTNSTSNTTGDLVVLGGAGIGDDVNIGGSVDIDTNLRIHGTSRFDDNVVLQGASKTLQLNNGSGTTKIEFQSTSGNGSLAGILDVTGNFNVNSNKFNVVAASGNTSIAGTLAVTQGTTMSAGLDLNSTLNVSNTVYFEDTNEPTWAKNSGTGLWEIQSNDYGAFRFDGGGYVAGDFMFDSDVVINGTILQRDDATETFNEQNYLRVRRKLFVGNIQALTPSYASHSNTNLRVYGGAGIQTDLHIGDDLYIGKLNSNDSVKFQVLGESGNTTIQGTLLVENNTNFNGTLDVDADFAVRNGTTDKFFVDNVTGNTDIQGTLDVNGATEITNTLDVSNAVTFDQTLTVQGNSEFNGTVDVDANFAVRSGSTDKMTVASSTGNIATDGTLVVQGQTTINDSLIVQASNEFFKVQNGSSADRFTIDTDNGNTSVIGTLTVSQATDLNNTLNVAGITTFENNTDQNITNVSYSADGAVRIDGGVGIDKKLAVGGASRFYGTAEFSSDLDINAAADISGNLTISNGNQVTSFADTTVALKVTGGARINKNLMTGGDFTVYDNSGGLNSFLVEVATGDATLRNDLVVGGNLTVNGTTTTVNSTTVTLDDPIMTLGGDTAPVSDDNKDRGIEFRYYDTQARLGFIGFDNNLEKFRFLVNATNSSEVFSGTDGSLQAGTLNLTGSGTALDVDNNANIDGTLTVDGVITSTKTSGAPFVVNSTSKVTNLNADLLDGMTTAATNTVSTVVARDSSGNFAAGTITAALVGNSSTATALETARNIAVAGVVSGTVSFDGTSDVSITTSFVDADVAALAAMSGTGMVTRTAGNTYAQRTLSKSGAGITITNGDGVSGNPTINIQSASTNSASNLVLRDASGNFSAGTVTANLTGNVTGNVTGTVSDISNHDTDDLSEGSTNVYYTNARADARVNLQTGANLSLANKTTTDLAEGTNQYYTEARVQAKLDNAYEQLRAMLTNLATSTTLTLNLSGDPTPGAVVAIGAIQNNGIGGFSNSTGLATGGGSGTSLTVDLTTSAGAITGIAINTPGTNYTTSDTITITNPNAGGVNAFNFGSLSAGTNYVSTNNVLTTGGSGTGLRVNFTAGSGNVTNVTVASAGSGYVNGETVTIPNDGAASASITAAGTGYSVDSLVSTTGGTGSGLTISIDTVNPGTGAITGLSIVSGGHGYTASDVITVSGGNGDATFTIGSVHAGNATIDISQVFTNATFALSDVTEMEVGATVTGATSGTTARISSLGATAITVDNVDGFFKKGEVVSANDVTTLTISSFS
Physico‐chemical
properties
protein length:1931 AA
molecular weight: 198695,43280 Da
isoelectric point:4,24487
aromaticity:0,06163
hydropathy:-0,16396

Domains

Domains [InterPro]
DC_1619
ATT
1–465
DC_1619 DC_1607 DC_0029 DC_0029
SSF69349
STR
4–230
SSF69349 DC_1607 DC_0029
IPR041352
ATT
5–42
IPR041352
M1U9F0
1 1931
Architecture
ATT
STR
STR
RBD
RBD
ATT 1-465 | STR 466-935 | STR 1139-1521 | RBD 1542-1783 | RBD 1847-1931
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SSM4
[NCBI] 		536466 Uroviricota > Caudoviricetes > Pantevenvirales > Greenvirus > Greenvirus ssm4
Host Synechococcus sp. WH 8018
[NCBI] 		166322 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
dd02d6389bd49c63f0e729d09fd6217863ed43d076c92492f979fd73a7bb4cd0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5553
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50