Protein

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Genbank accession
XLL19248.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MAAKYYTILTDIGKAKVANAAALGRQIKLTQLAIGDGDGNEYDPTEDQTSLRLEQYRVPISHLGVDSSNSNWIVAEGMIPVDVGGWFVREVGIFDDDGDLIAIGKYPETYKPTLSEGTGRDLYVRFIMVVSNVDTIDIKIDPTVEISTKTWVLETISKDKVQAKQLATFRNNIRAGNPVTICCLGDSLTYGYDTQSSDRLDGNTHGINGSKVDRASKQYPESMAGFLNDVYGDDVVTVMNRGYSGDTAQTAFDRWTTASGADATIIMLGTNDASSSWGTKVDVATYIDNYEKLILREISWGSAVIIAVPPTSSTASNSTLDTFRNALVILAHKYGISVVDTTEFISVYDYDSPEYGIHSDGTHFNGRGYEIIGAKMAAVFLGELFDNPVIAHDRILATRQALDGFTVGRGAYLQSNNGGAFTPNERVCKIPVGGVMTYSFYLEADTYVYPVAWLPASTVMELLIDFGTIRPLSLLNYKDIEPAGEQKYVYDAQPSYTLKDEYGVTGSKNPVVYGRGWHTVTIKNVSSSDRIVFNALSFLQFKPEYIKPEFYGYMTVLSHPEWSESPTPVSSLKVDRQALSDALKLPNIVDGQFYRNPLLKLTIESNSESFTYGYFYQLPSQGGGGTGVFIDSQAVTVDSSGTPDINPVKISNIAYDSTNDEFVITLDKTHSITFNITITIA
Physico‐chemical
properties
protein length:681 AA
molecular weight: 74683,77030 Da
isoelectric point:4,72164
aromaticity:0,10573
hydropathy:-0,16784

Domains

Domains [InterPro]
IPR022225
ATT
1–149
IPR022225 IPR036514 DC_2159
IPR051934
Unmapped
1–160
IPR051934 SSF52266
DC_1371
STR
1–350
DC_1371
cd00229
ENZ
181–379
cd00229
IPR013830
ENZ
183–371
IPR013830
XLL19248.1
1 681
Architecture
ATT
STR
RBD
ATT 1-149 | STR 150-381 | RBD 382-605 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL19248.1
1 681
Domain Start End Length (AA) Confidence
N-terminal 1 161 161 0,9957
Central domain 162 509 349 0,8554
C-terminal 510 681 171 0,4530
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-161
Central
162-509
C-terminal
510-681

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 10N.237.312.C11_PE002B
[NCBI] 		3385270 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL19248.1 [NCBI]
Genbank nucleotide accession
PQ189290 [NCBI]
CDS location
range 22618 -> 24663
strand +
CDS
ATGGCCGCAAAATATTACACGATATTAACAGACATAGGCAAAGCCAAGGTTGCTAATGCGGCCGCGCTAGGCCGTCAAATCAAGCTGACTCAGTTAGCTATAGGTGATGGTGATGGCAATGAATATGATCCAACCGAAGATCAAACATCATTAAGATTGGAGCAATATAGAGTTCCAATATCACATCTTGGCGTTGATTCTAGTAATTCAAACTGGATTGTTGCAGAGGGTATGATTCCTGTTGATGTGGGTGGGTGGTTTGTCCGTGAAGTTGGTATTTTTGATGATGATGGTGATCTCATTGCTATTGGTAAATATCCAGAGACATATAAACCTACCCTGTCAGAAGGTACTGGCCGTGATTTGTACGTGCGTTTTATTATGGTTGTATCAAATGTTGATACGATTGATATCAAGATTGATCCAACGGTTGAAATCTCAACTAAAACATGGGTTCTTGAAACAATATCAAAAGATAAAGTACAGGCTAAACAATTAGCCACATTTAGAAATAATATTCGCGCTGGCAACCCTGTAACAATTTGCTGTTTGGGGGATTCTCTCACGTACGGTTATGACACTCAATCCTCTGACAGGTTAGACGGAAATACTCATGGTATTAACGGTTCAAAGGTAGACCGAGCATCAAAGCAATACCCTGAATCAATGGCTGGTTTTTTAAATGATGTGTACGGTGATGATGTTGTCACAGTTATGAACCGTGGCTATTCAGGTGACACGGCTCAAACAGCTTTTGATAGATGGACTACAGCAAGTGGTGCTGATGCTACAATTATAATGCTGGGCACTAACGATGCTAGCTCTAGTTGGGGCACTAAAGTTGATGTTGCTACGTACATTGATAATTATGAAAAATTGATTTTACGTGAAATATCTTGGGGGAGTGCTGTTATTATTGCGGTCCCGCCGACCTCTAGCACCGCATCAAATAGTACATTAGACACATTTCGTAACGCATTGGTTATATTGGCCCATAAATACGGTATTTCTGTCGTTGATACGACTGAGTTTATTTCTGTTTATGATTATGATTCTCCAGAATATGGGATTCATTCTGATGGCACTCATTTTAATGGCCGTGGTTATGAAATTATCGGTGCAAAAATGGCGGCTGTATTTTTAGGAGAATTGTTTGATAACCCAGTTATTGCCCACGATAGAATTTTAGCTACTCGACAGGCTCTTGATGGTTTTACGGTTGGTCGTGGCGCGTATTTACAAAGTAATAACGGTGGTGCGTTTACGCCAAATGAGCGAGTGTGCAAAATTCCGGTGGGCGGAGTGATGACATATTCATTTTATTTAGAAGCAGATACATATGTATATCCAGTCGCGTGGTTGCCTGCCTCTACTGTAATGGAATTATTAATTGATTTTGGCACTATTAGGCCATTGTCCTTATTGAATTATAAAGATATTGAGCCAGCTGGAGAGCAAAAATATGTATATGACGCCCAACCATCATATACATTAAAGGATGAGTATGGTGTAACAGGCTCTAAAAACCCCGTTGTATATGGTAGAGGTTGGCATACTGTCACTATTAAGAATGTGTCGTCATCCGATAGAATTGTATTTAATGCTTTGTCATTTTTGCAGTTTAAACCCGAATATATAAAGCCTGAGTTTTATGGTTATATGACGGTATTAAGTCATCCTGAATGGTCAGAATCACCAACACCAGTCTCGTCATTGAAAGTTGATAGGCAAGCATTATCTGATGCACTTAAATTACCAAACATTGTGGATGGTCAATTTTATAGAAACCCGCTATTAAAACTTACTATTGAAAGTAATAGCGAGTCATTTACTTATGGATATTTTTATCAACTACCAAGTCAGGGAGGAGGGGGAACTGGGGTCTTTATTGATTCTCAGGCAGTAACTGTTGATTCTTCGGGTACGCCTGATATCAACCCTGTGAAAATATCGAATATAGCTTATGACAGTACCAATGATGAGTTTGTTATAACGCTGGATAAAACACATTCAATTACTTTCAATATAACGATCACTATCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d8059dd6aa64726274d8d55742b053ff16c9f06d4caa3d509a5c70e808e5c457
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6679
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50