Protein

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Genbank accession
BDA82390.1 [GenBank]
Protein name
lipase acylhydrolase domain protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MSKKLKIYNKNNELLKESPYIEGSIGEITIDNLTPDTEYKEGDFKVCWDINGKESKHVNVPGFSTLKNSNEKILIVSYNVESPTTITAQNIEGLENSIDNYFYGSLYYDVIEIVNDSTEGKINGLKGEIRDKRISPLENKIGLFIGDSITEINGRTQNNYHGFIADRTGLEVRNLGISGTGYQDRKNVAYDITEQPDFICIMLGTNDYGVVGGNNRELGNSKEHMYGTVAGSIYYTYLQLSREFPTTPIVVLTPTPRIDSNPYNEKTNSKGYTLGELVQVIKDIAELFSFPVLDLYYDSNIRIWDSNVNNIFFSSGSNPPDGLHPNTTGHEWLSNLIQPFLELKAVLGSRIEKPIINHEIQDLGNGVFTKVIRPTGIFHKEDQSFIININKEDIDLSKNKLLKVVYNGHQINDPNGVLDNSPYWYTLSNYEDGNEYNKTSLVSEFKKGLDTIDIVNDGRIEYLRDYMTLYFTDISNTDIKGSDINIEDNSIPTEETTPTPSEPSIPVITPIDNEDGTFTVTLTPIKVSWKQDQSFMININESQLNLTGKKVQNIEVNGTQLINPYETASNHFYWLSVPTSEEGTEYNRTEQISNFVTELEISNTESDGRIVYKPIPIKITYK
Physico‐chemical
properties
protein length:622 AA
molecular weight: 70297,52920 Da
isoelectric point:4,70947
aromaticity:0,09646
hydropathy:-0,51077

Domains

Domains [InterPro]
SSF52266
STR
135–341
SSF52266
IPR036514
STR
135–340
IPR036514 DC_0605
IPR036514
STR
137–347
IPR036514
IPR051532
Unmapped
143–339
IPR051532
IPR013830
ENZ
144–331
IPR013830
BDA82390.1
1 622
Architecture
STR
RBD
STR 135-347 | RBD 348-622
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BDA82390.1
1 622
Domain Start End Length (AA) Confidence
N-terminal 1 231 231 0,6736
Central domain 232 545 315 0,4060
C-terminal 546 622 76 0,1640
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-231
Central
232-545
C-terminal
546-622

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SsapH-Golestan-105-M
[NCBI] 		2872011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus saprophyticus
[NCBI] 		29385 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDA82390.1 [NCBI]
Genbank nucleotide accession
LC648442 [NCBI]
CDS location
range 109417 -> 111285
strand +
CDS
ATGTCAAAAAAACTTAAAATTTATAATAAAAATAATGAGCTACTAAAAGAAAGTCCATATATTGAAGGTTCTATAGGAGAGATAACTATAGACAATCTAACACCTGATACTGAATATAAAGAAGGTGATTTTAAAGTATGTTGGGATATAAACGGTAAAGAATCAAAACATGTCAATGTTCCGGGTTTTTCTACTTTAAAAAACTCTAATGAGAAAATACTTATAGTAAGCTATAATGTAGAAAGTCCGACAACAATAACTGCTCAAAATATAGAAGGGTTAGAAAATAGTATAGATAACTATTTTTATGGTAGTCTTTATTATGATGTTATAGAAATTGTAAATGATAGTACTGAAGGGAAAATAAATGGTCTTAAAGGTGAGATTAGAGATAAACGTATTTCTCCTTTGGAAAATAAAATAGGATTATTTATCGGTGATAGTATTACTGAAATAAATGGAAGAACCCAAAATAATTATCATGGTTTCATTGCAGATAGGACTGGTTTAGAAGTTCGTAACCTGGGTATAAGTGGTACAGGTTACCAAGATAGAAAAAATGTAGCATATGACATTACAGAACAACCTGATTTTATTTGTATAATGTTGGGTACAAATGATTATGGAGTTGTCGGAGGTAATAATAGGGAGTTAGGAAATTCTAAAGAGCATATGTATGGTACTGTAGCAGGTTCTATTTATTATACCTACTTACAGCTATCAAGAGAATTTCCTACTACACCAATAGTAGTTTTAACTCCTACACCTAGGATAGATAGTAATCCGTACAACGAAAAGACAAACAGTAAAGGATATACATTAGGAGAACTTGTTCAAGTTATCAAGGATATAGCTGAATTATTTTCTTTCCCTGTATTAGATTTATATTACGATAGTAATATACGAATTTGGGACTCTAATGTTAATAATATCTTTTTCTCTTCCGGTAGTAACCCTCCAGACGGGTTACACCCTAATACAACAGGTCATGAGTGGCTTTCTAACCTTATACAACCTTTTTTAGAATTAAAAGCAGTATTAGGTTCTAGAATAGAAAAACCTATAATAAACCATGAAATACAAGATTTAGGTAATGGTGTATTTACAAAGGTAATAAGACCAACAGGAATATTCCATAAGGAAGACCAAAGTTTCATTATTAATATAAATAAAGAAGATATAGACTTATCAAAAAATAAATTATTAAAAGTAGTATATAATGGACATCAAATAAATGACCCTAATGGTGTATTAGACAATTCACCTTATTGGTACACGTTATCTAACTATGAAGATGGAAATGAATACAATAAAACTAGCTTAGTATCAGAGTTTAAAAAAGGTTTAGATACTATAGATATTGTTAATGATGGTAGAATAGAGTATTTAAGAGACTATATGACTCTATATTTTACAGATATATCTAATACTGATATAAAAGGCTCAGATATAAATATAGAAGATAATTCTATACCAACAGAAGAAACAACTCCTACACCATCAGAACCAAGTATTCCAGTAATTACACCTATAGATAATGAAGATGGAACATTTACAGTTACACTAACACCTATTAAAGTGTCTTGGAAACAAGACCAAAGTTTTATGATTAATATCAATGAAAGTCAATTAAATTTAACAGGTAAAAAGGTACAAAATATTGAAGTTAACGGAACACAATTAATAAATCCTTACGAAACAGCAAGTAATCATTTCTACTGGTTATCAGTACCTACAAGTGAAGAAGGTACGGAATATAATAGAACAGAGCAAATATCTAACTTTGTTACTGAATTAGAAATTAGTAATACTGAATCTGATGGAAGGATTGTATATAAACCAATTCCTATTAAAATAACATATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d270c336ac99cdb940f2d3a03887067ee986fb69d71296353004d7ca25b62e41
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7248
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of phage genome Yazdi,M., Ghaemi,E.A., Shirzad-Aski,H., Mohebbi,A., Tabarraei,A., Sabzali,S. and Rafiee,M. 2013-08-01 — GenBank