Protein

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Genbank accession
XPN52027.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHTGNYNQTGDYTLNGVFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELITKSSGTSHVRFFDNNSRERGIIYAPANDGLTTQVLNIRVQDYAAGSESIYAFSGSGLFISPEVSAHKSISSPQILTDKVITNGKKAGDYDIYSLANNTPLSESTTAINHLRVMRNAVGSGIFHEVKDNDGITWYTGDGLDTYLWSFTWSGGLKAGHSISIGTPGGPKGYSELGTASIALGDNDTGLKWHQDGYYFSVNNGTKTFLFSPNETTSLRKFVAGYSTNGADLTTPPTENYALATVVTYHDNNAFGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGDINVIGGSVNIDGINNSSTLLFRGNTTGASSVDNMTISVWGNTFTNPSVGNRKNVMEISDATSWMSYIQRLTTGEVEMNVNGSFESSGVTAGHRGVHTPGEISSGAVNALRIWNADYGAIFRRSEGSLHIIPTAYGEGKHGDIGPLRPFSMALDTGKVTIPDLQSSYNTFAANGYIKFAGHGAGAGGYDIQYVQAAPIFQEIDDDAVSKYYPIVKQKFLNGKAVWSLGTEINSGTFVIHHLKEDGSQGHTSRFNQDGTVNFPDNVQVGGGEATIARNGNIWSDIWKTFTSAGDTTNIRDAIATRVSKEGDTMTGRLTLNANSDAIVINSTATESGYLKGQKAGVDNWYVGNGGADNAISFYSFQNRSGIYVNNGGDIALNPEGSATFNFNRDRLFINGSVWTSHQAGDWGNQWRQEAPIFVDFGYVGNDSYYPIIKGKSVITNEGYVSGVDFGMRRITNTWAQGIIRVGNQENGSDPQAIFEFHHNGNMYVPDMVKAGVRISAGGGDPVWTGACVVIGDNDTGLVHGGDGRINMVANGIHIANWGAGYQSHPGLWDSTGAFWTEVGRAIVSHGHLVQANDSYSTFVRDVYVRSDIRVKKDLVKFENASEKLSKINGYTYMQKRGLDEEGNQKWEPNAGLIAQEVQAILPELVEGDPDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKKLVKSLLK
Physico‐chemical
properties
protein length:1103 AA
molecular weight: 118808,05220 Da
isoelectric point:5,62305
aromaticity:0,09610
hydropathy:-0,33835

Domains

Domains [InterPro]
DC_0538
STR
1–686
DC_0538 G3DSA:6.20.80.10 IPR030392
DC_0339
STR
615–1046
DC_0339 Coil
IPR030392
CHP
993–1052
IPR030392
DC_2193
RBD
1027–1103
DC_2193
XPN52027.1
1 1103
Architecture
STR
RBD
STR 1-1046 | RBD 1047-1103
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPN52027.1
1 1103
Domain Start End Length (AA) Confidence
N-terminal 1 506 506 0,0893
Central domain 507 705 200 0,2756
C-terminal 706 1103 397 0,8171
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-506
Central
507-705
C-terminal
706-1103

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Pu-Krd-SF5
[NCBI] 		3389966 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN52027.1 [NCBI]
Genbank nucleotide accession
PQ759885 [NCBI]
CDS location
range 155777 -> 159088
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGCGAATTGGCTATAAACTTAAAAGACCGTGTACTTTTTACTAAAGATGACCAAGGAAATATTATTGATCTGGGTTTTGCTAAAGGCGGTAGTATTGACGGGAATGTTATTCATACAGGCAATTATAACCAAACTGGCGATTATACTTTAAATGGCGTCTTCACTCAGACTGGTAATTTTAATTTAACTGGTATTGCTCGAGTAACTCGTGATATTATTGCCGCTGGGCAGATTATGACTGAAGGCGGTGAACTTATTACAAAAAGTTCAGGTACATCACATGTTCGTTTTTTCGATAATAATAGTCGCGAACGTGGAATCATTTATGCCCCGGCTAATGATGGTTTAACTACACAAGTACTTAATATCAGGGTTCAAGACTACGCTGCTGGTAGCGAAAGCATTTATGCATTTTCAGGCAGTGGCCTATTTATTTCACCTGAAGTATCAGCACATAAATCTATTTCGTCTCCACAAATTCTGACCGACAAAGTTATTACAAACGGGAAGAAGGCAGGAGATTATGATATCTATTCATTAGCAAATAACACCCCATTATCTGAAAGCACTACTGCTATTAATCATCTTCGTGTCATGCGTAATGCAGTCGGTTCTGGCATTTTCCATGAAGTTAAAGATAATGATGGAATAACTTGGTATACTGGAGATGGCTTAGACACTTATCTTTGGTCGTTTACATGGTCAGGTGGATTGAAAGCGGGACATTCTATTTCTATAGGTACCCCAGGCGGTCCAAAAGGATATTCTGAATTAGGAACGGCCTCAATTGCTCTTGGTGATAATGACACTGGGTTAAAATGGCATCAGGACGGATATTATTTTAGCGTTAATAATGGAACAAAAACGTTTTTATTTAGTCCCAACGAAACAACTAGCCTAAGAAAATTTGTAGCTGGATATTCTACCAACGGAGCCGATTTAACTACTCCTCCAACTGAAAACTATGCTCTTGCTACTGTAGTGACATACCACGATAATAACGCGTTTGGAGACGGTCAGACTCTTTTAGGATATTACCAAGGCGGTAATTATCATCACTATTTCCGCGGTAAAGGTACTACAAACATTAATACTCACGGTGGTTTATTAGTTACTCCAGGTGATATTAATGTTATCGGTGGTTCGGTTAATATTGATGGTATAAATAATTCTTCTACCCTGCTATTTAGAGGTAACACGACCGGAGCTAGTTCAGTTGATAATATGACAATTTCTGTATGGGGTAATACGTTTACTAATCCTAGTGTAGGTAATCGTAAAAACGTCATGGAAATTTCTGATGCAACTAGTTGGATGAGCTATATTCAAAGACTTACAACAGGTGAAGTAGAAATGAACGTTAACGGTTCATTTGAATCATCTGGTGTTACTGCTGGACATAGAGGAGTTCACACACCAGGCGAAATTTCATCTGGGGCGGTGAATGCACTTCGTATTTGGAATGCAGATTATGGAGCCATTTTTAGACGTTCAGAAGGAAGTCTTCATATTATTCCAACTGCTTATGGTGAAGGTAAACACGGCGATATCGGTCCACTTCGCCCGTTTAGTATGGCTTTAGATACCGGTAAAGTTACTATTCCAGATTTACAATCAAGTTACAATACGTTCGCTGCTAACGGTTATATTAAATTTGCTGGTCATGGCGCAGGCGCTGGTGGTTATGATATTCAATATGTTCAAGCGGCTCCTATTTTCCAGGAAATCGATGATGATGCTGTAAGTAAATATTATCCTATTGTTAAGCAGAAGTTTTTAAACGGTAAAGCAGTTTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTCGTTATTCATCATCTGAAAGAAGATGGATCACAAGGCCATACGTCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCTGATAACGTTCAGGTTGGTGGTGGTGAAGCTACTATTGCTCGCAACGGTAACATCTGGTCTGATATCTGGAAAACGTTTACTTCTGCCGGTGATACTACAAATATTCGCGATGCTATTGCGACTCGTGTTTCGAAAGAAGGCGACACGATGACAGGCCGCTTAACTCTTAATGCAAACTCTGATGCCATCGTTATTAATAGCACGGCAACCGAATCTGGCTATTTGAAAGGACAAAAAGCAGGCGTTGATAACTGGTATGTAGGTAATGGTGGTGCTGATAATGCCATATCGTTTTATAGTTTCCAAAATAGATCAGGCATATATGTTAATAATGGCGGTGATATTGCTTTAAACCCGGAAGGGTCTGCCACTTTTAATTTTAATAGGGACCGACTTTTTATTAATGGCTCTGTCTGGACCAGTCATCAGGCCGGCGATTGGGGAAATCAATGGCGCCAGGAAGCTCCGATATTTGTGGATTTTGGCTACGTCGGTAATGATAGTTATTATCCAATTATCAAAGGAAAATCTGTTATTACGAATGAAGGATACGTATCTGGTGTTGATTTTGGTATGCGACGCATTACTAATACATGGGCACAAGGTATTATCCGTGTAGGTAATCAGGAAAACGGTTCCGACCCACAAGCTATCTTCGAATTCCATCATAATGGAAACATGTACGTTCCTGACATGGTTAAAGCTGGAGTAAGAATATCGGCTGGTGGAGGTGACCCTGTATGGACAGGCGCATGTGTTGTTATTGGTGATAATGATACTGGATTAGTTCATGGTGGTGACGGTCGAATCAATATGGTTGCCAATGGTATACATATTGCAAACTGGGGAGCAGGCTATCAATCTCATCCTGGGCTTTGGGATTCAACCGGTGCTTTTTGGACAGAAGTTGGAAGAGCTATCGTTTCTCATGGGCATCTCGTTCAGGCAAATGATAGTTATTCAACGTTTGTCCGTGATGTTTATGTCCGTTCTGATATTCGAGTTAAAAAAGACCTTGTTAAATTTGAAAATGCTTCTGAGAAGCTTTCTAAAATTAACGGTTACACTTATATGCAGAAACGAGGTCTAGATGAAGAAGGTAATCAGAAATGGGAACCTAACGCTGGTTTGATAGCTCAAGAAGTTCAAGCTATTTTACCAGAATTAGTTGAAGGCGACCCGGATGGTGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAATGAGCATACTGCAGAAATTGCAGAACTTAAGTCAGAGATTGAAGAGCTTAAAAAATTAGTTAAATCATTGTTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba216f20bd53a72c996e6cf0996a6e1d12e1cb9094b92a78f42f4f3b225e2f64
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2856
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50