Protein

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Genbank accession
AJD82021.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLSVEQKIAIRELSKTILADGISEVVFEKKDGSIRVMKSTRDKTVISGLVGESVYESYINPEKPRAESVDMIPVFDVEAKAWRGFSLEKLISINSTKIETLRELANV
Physico‐chemical
properties
protein length:108 AA
molecular weight: 12060,78950 Da
isoelectric point:5,55495
aromaticity:0,05556
hydropathy:-0,11759

Domains

Domains [InterPro]
IPR024401
STR
19–92
IPR024401
AJD82021.1
1 108
Architecture
STR
STR 19-92 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_TG1
[NCBI] 		1589265 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tegunavirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJD82021.1 [NCBI]
Genbank nucleotide accession
KP202158.1 [NCBI]
CDS location
range 127594 -> 127920
strand -
CDS
ATGAGCTTATCAGTTGAACAAAAAATTGCTATTCGTGAATTGTCTAAAACTATTCTGGCTGATGGCATATCTGAAGTAGTATTTGAAAAGAAAGACGGCAGTATTCGTGTAATGAAGTCTACCAGAGATAAAACCGTTATTTCTGGTTTAGTTGGTGAATCCGTTTATGAAAGTTATATTAATCCAGAAAAGCCACGTGCTGAATCTGTAGATATGATTCCTGTATTTGATGTTGAAGCTAAAGCATGGCGTGGATTTAGCCTCGAGAAATTGATTTCTATTAATTCTACTAAGATCGAAACTCTTCGTGAATTAGCTAATGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b3212669e58af8ee5c01191f7452f44232e503dc9c823c0d20e4e0d19f337742
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of vB_YenM_TG1, a broad host range bacteriophage which infects Yersinia enterocolitica Leon-Velarde,C.G., Kropinski,A.M., Chen,S., Griffiths,M.W. and Odumeru,J.A. 2014-10-28 — GenBank