Protein

View in Explore
Genbank accession
BAQ22829.1 [GenBank]
Protein name
short tail fibers
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MATNTLNHVSDASIYKTFNPAGTAFPSSITNVQAALAAINQQAVDGIPGATQTIIGISRFANQSEVDAGVLTNVAVSPATLKSTVTRPQASETVVGLTRYATDAEAVAGTLRDAAIVPASLKAHTNDLFTRVFARQATETATGVAKISTNAAALAGTDDTTIMTPKKTLAAINNATSKIPSPSIATTTSNGLVRIALPGEVIAGTLDNGIAVSPKGLASLISTTDRRGLVELATGAEVSGGTDTTRAITPATLLSRTGAVNRLGLVKLTTTVGSGDGSTALAYNADVVHLRGGQTINGNLGLTGQITAGNFNLTGSGTIGGNLNVVGNLTRNGRQVVTVDMIGDDVPVGVIMMWAGPLNRVPAKWRQADGWAGYIGNSAYATLQSIFPSGIPDMRGLFVRGAGVGVHITSQVGTDSKGKPKLGNGCGGGAVGAVQAQMVRTHKHESGWGEHHTRPEARNGCTVRNGYKGSNKTDNDNYKYFTNDGAEVEAANIRDAFGTMNSEGLMGAENRPWNMSVYYIIKIQ
Physico‐chemical
properties
protein length:524 AA
molecular weight: 54048,11200 Da
isoelectric point:9,19031
aromaticity:0,04771
hydropathy:-0,08702

Domains

Domains [InterPro]
DC_0176
STR
1–500
DC_0176
SSF69349
STR
249–319
SSF69349 SSF88874
G3DSA:2.10.280.10
Unmapped
249–286
G3DSA:2.10.280.10 IPR037053 IPR044916
IPR015173
STR
250–319
IPR015173 IPR027448
BAQ22829.1
1 524
Architecture
STR
ATT
STR
STR 1-344 | ATT 345-398 | STR 399-523 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage PEi20
[NCBI] 		1608310 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kanagawavirus
Host Edwardsiella ictaluri
[NCBI] 		67780 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAQ22829.1 [NCBI]
Genbank nucleotide accession
AP014714.1 [NCBI]
CDS location
range 97357 -> 98931
strand +
CDS
ATGGCAACTAATACACTAAATCACGTAAGTGATGCATCGATTTATAAAACATTTAATCCTGCTGGTACGGCATTTCCTTCCAGCATTACAAACGTTCAGGCCGCATTAGCGGCCATTAACCAACAGGCCGTAGATGGTATTCCTGGAGCTACTCAAACTATTATTGGTATTAGCCGTTTTGCTAACCAATCTGAGGTAGATGCAGGCGTATTGACAAACGTGGCTGTTTCACCGGCTACTTTAAAATCTACCGTAACCCGTCCTCAGGCTTCAGAAACCGTAGTTGGTCTTACTCGTTATGCTACTGATGCCGAAGCAGTTGCTGGTACTTTACGTGATGCAGCCATTGTCCCAGCTAGTCTTAAAGCACATACTAACGATCTTTTCACTCGTGTATTTGCTCGTCAGGCAACAGAAACTGCAACCGGTGTTGCAAAGATTTCTACTAACGCCGCAGCATTAGCCGGTACCGATGATACCACTATTATGACCCCTAAGAAGACGTTAGCAGCAATTAATAATGCTACGTCTAAGATTCCATCACCATCTATTGCAACCACCACCTCAAATGGCCTGGTACGTATTGCACTGCCTGGTGAAGTTATTGCTGGGACTCTTGATAATGGTATTGCTGTTTCTCCTAAAGGATTAGCGAGCCTTATTTCTACGACTGATCGCCGTGGTCTTGTTGAATTAGCTACCGGTGCCGAAGTTTCTGGTGGTACTGATACTACTCGTGCTATTACACCGGCAACTCTTTTAAGTCGTACTGGTGCTGTGAACCGTCTTGGTCTGGTTAAATTAACCACGACTGTAGGTTCCGGCGATGGTTCTACTGCGTTAGCTTATAATGCCGATGTTGTCCATCTTCGTGGTGGTCAAACAATCAATGGTAACTTAGGATTAACCGGACAAATTACCGCAGGCAACTTCAACTTAACCGGTTCTGGTACTATTGGCGGTAATTTAAACGTTGTTGGTAACCTTACTCGTAATGGCCGCCAAGTTGTTACCGTCGATATGATTGGTGATGATGTTCCAGTCGGTGTAATTATGATGTGGGCCGGTCCATTGAACCGTGTTCCGGCTAAATGGCGTCAAGCCGATGGTTGGGCAGGATATATCGGCAATAGTGCTTATGCAACTCTCCAATCTATATTCCCTAGTGGAATTCCTGATATGCGTGGTTTATTTGTTCGTGGTGCAGGTGTTGGTGTTCATATTACCAGCCAAGTAGGTACGGATTCAAAAGGTAAACCTAAATTAGGTAATGGTTGTGGCGGTGGTGCAGTAGGCGCAGTTCAAGCCCAAATGGTTCGTACTCACAAACATGAATCTGGTTGGGGTGAACACCACACTCGTCCTGAAGCTCGTAACGGTTGTACTGTTCGTAACGGTTATAAAGGTTCTAATAAAACCGATAACGATAACTACAAATACTTCACTAATGACGGTGCCGAAGTAGAAGCGGCTAATATTCGTGATGCTTTCGGAACAATGAACTCTGAAGGCCTGATGGGCGCAGAAAACCGTCCGTGGAATATGTCGGTTTATTACATTATCAAAATACAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2b3d056160dbd5e31cf40535dfa9b5dea64e090cd1264ca9f9d2c8b58b828be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6900
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Edwardsiella bacteriophages, PEi20 and PEi26 Yasuike,M., Nishiki,I., Iwasaki,Y., Nakamura,Y., Fujiwara,A., Hassan,E.S., Mahmoud,M.M., Kawato,Y., Nagai,S., Kobayashi,T., Ototake,M. and Nakai,T. 2013-02-28 — GenBank