Protein

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UniProt accession
A0A088FRH4 [UniProt]
Protein name
Long tail fiber protein Gp37
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MATLKQIQFKRSKTAGARPAASVLAEGELAINLKDRVLFTKDDQGNIIDLGFAKGGSIDGNVIHIGNYNQTGDYTLNGVFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELITKSSGTSHVRFHDSADRERGIIFSPANDGLTTQVINIRVQDYAAGSESTYAFSGSGQFISPEVSAWKSMSTPQILTDKVITDGKKAGDYDIYSLANNNSNTDKNNLRVVRTDPAAAMLHEICENNGISWYSGSTPTDYMLSFAYSGGFQAGHSIAVGMESGPMTYSTLGKSSIVLGDNDTGFKWHQDGYYFSVNNGTKTFLFNPSETTSLRKFVAGYSTNGTDLTTPPTENYALATVVTYHDNNAFGDGQTLLGYYQGGNYHHYFRGKGTTNINTHGGLLVTPGNIDVIGGSVNIDGRNNSSTLMFRGNTTGYSSVDNMDIKVWGNTFVDPSGGIRKNVMEISDATSWMSYIQRLTTGEVEMNVNGSFESSRVTAGDRGVYTTGEISSGAVNALRIWNADYGAIFRRSEDSLHIIPTTYGEGKHGGIGPLRPFSLALDTGKVTIPDLQSKYNTITANGYIKFVGHGAGAGGYDIQYAQAAPIFQEIDDDAVNKYYPIVKQKFLNGKAVWSLGTEINSGTFVIHHLKEDGTQGHTSRFNQDGTVNFPDNVLVGGGEAAIARNGNIFSDIWKTFTSAGDVTNIRDAIATRVAKEGDTMTGTLWINKDAAGIVLNPPLASDSSFIRSDTAGANNWYIGKGGADNGLGFYSYITQGGVYITTNGEISLSPQGQGTFNFNRDRLHINGTQWTAHQGGDWANQWRQEAPIFVDFGNVGNDSYYPIIKGKSGITNEGYVSGVDFGMRRITNTWAQGIIRVGNQENGSDPQAIYEFHHNGVFYAPSLLKSSRVSAGGGDPAWAGPCIVLGDNDTGLLWENDGIFNAYANGQGVFSFRPGLAQTFGDVNFHCNAGMYVRDNIDVNDVYIRSDIRCKSEIKLIENAQEKSKLLGGYTYLLKNSVTDEVKPSAGLIAQEVQEVLPELVSEDKETGLLRLNYNGIIGLNTAAINEHTDEIKELKSEIAELKALIKSLIK
Physico‐chemical
properties
protein length:1079 AA
molecular weight: 116675,99410 Da
isoelectric point:5,38967
aromaticity:0,09824
hydropathy:-0,33753

Domains

Domains [InterPro]
DC_0538
STR
1–680
DC_0538 G3DSA:6.20.80.10 IPR030392 Coil
DC_0339
STR
612–1068
DC_0339
IPR030392
CHP
974–1067
IPR030392
A0A088FRH4
1 1079
Architecture
STR
STR 1-1068 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A088FRH4
1 1079
Domain Start End Length (AA) Confidence
N-terminal 1 888 888 0,0598
Central domain 889 1068 181 0,2233
C-terminal 1069 1079 10 0,9851
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-888
Central
889-1068
C-terminal
1069-1079

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Shf125875
[NCBI] 		1541825 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM50828.1 [NCBI]
Genbank nucleotide accession
KM407600 [NCBI]
CDS location
range 156293 -> 159532
strand +
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGCAAAACTGCAGGAGCACGTCCTGCCGCTTCAGTATTAGCCGAAGGTGAATTGGCTATAAACTTAAAAGACCGTGTACTTTTTACTAAAGATGACCAAGGAAATATTATTGATCTGGGTTTTGCTAAGGGTGGTAGTATTGACGGGAATGTTATTCATATAGGAAACTATAATCAAACTGGTGATTATACTTTAAATGGCGTCTTCACTCAGACTGGTAATTTTAATTTAACTGGTATTGCTCGAGTAACTCGCGATATTATTGCCGCTGGGCAGATTATGACTGAAGGCGGAGAACTTATTACAAAAAGTTCAGGTACATCACATGTTCGTTTTCATGATTCAGCTGACCGTGAACGTGGAATCATTTTTTCTCCTGCTAATGATGGATTAACTACACAAGTAATTAATATTAGAGTTCAAGACTACGCAGCTGGTAGCGAAAGCACCTATGCATTTTCAGGCAGTGGACAATTTATTTCACCTGAAGTATCGGCATGGAAATCTATGTCAACTCCTCAGATTTTGACTGACAAAGTCATTACAGACGGGAAGAAGGCAGGTGATTATGACATCTATTCATTAGCAAATAATAATTCTAATACAGATAAAAATAATTTACGTGTTGTACGTACCGACCCAGCGGCCGCAATGCTCCATGAAATTTGTGAAAACAACGGCATCAGTTGGTATTCTGGTTCAACCCCTACTGATTATATGTTATCTTTTGCTTATTCCGGCGGTTTTCAAGCAGGCCATTCGATTGCAGTAGGTATGGAATCAGGGCCTATGACATATTCAACCTTAGGTAAAAGTTCTATTGTTCTTGGGGATAATGATACTGGATTTAAATGGCATCAAGACGGATATTATTTCAGCGTTAATAATGGAACAAAAACGTTTTTATTTAATCCTAGCGAAACAACTAGCCTAAGAAAATTTGTAGCTGGATATTCTACTAATGGAACCGATTTAACTACTCCTCCAACTGAAAACTATGCTCTTGCTACTGTTGTGACATATCACGATAATAACGCGTTTGGAGATGGTCAGACTCTTTTGGGATATTATCAAGGCGGTAACTATCATCACTATTTCCGTGGTAAGGGTACCACAAACATTAATACTCATGGCGGTTTGTTGGTTACTCCTGGTAATATTGATGTTATTGGCGGTTCTGTTAATATAGATGGTAGAAATAATTCTTCTACACTAATGTTTAGAGGCAACACAACAGGATACAGCTCGGTTGATAATATGGATATTAAAGTTTGGGGTAATACGTTTGTTGATCCAAGCGGAGGTATCCGTAAAAACGTCATGGAAATTTCTGATGCAACTAGTTGGATGAGCTATATTCAAAGACTTACAACAGGTGAAGTAGAAATGAACGTTAACGGTTCATTTGAATCATCTCGTGTTACTGCTGGAGATAGGGGAGTTTACACAACAGGCGAAATTTCATCTGGGGCTGTGAATGCGCTTCGTATTTGGAACGCAGATTATGGAGCTATTTTTAGACGTTCAGAAGATAGTCTTCATATTATTCCAACTACTTACGGTGAAGGTAAACACGGCGGTATCGGTCCACTTCGCCCGTTTAGTTTGGCTTTAGATACCGGTAAAGTTACTATTCCAGATTTACAGTCAAAATACAATACGATCACTGCGAACGGCTATATTAAATTTGTTGGTCATGGAGCGGGTGCCGGCGGTTATGACATTCAATATGCTCAAGCAGCTCCTATTTTCCAGGAAATTGATGATGATGCTGTAAACAAATATTATCCTATTGTTAAACAGAAGTTTTTAAATGGTAAAGCCGTCTGGTCTTTAGGTACTGAAATTAATTCGGGTACATTCGTTATTCATCATTTAAAAGAAGACGGAACTCAAGGACATACATCTCGTTTTAATCAAGACGGTACTGTTAACTTCCCAGATAACGTTCTGGTCGGTGGTGGTGAAGCTGCTATTGCTCGTAATGGTAATATTTTCTCGGATATTTGGAAAACGTTTACTTCTGCAGGCGACGTAACTAATATTCGCGACGCAATAGCTACTCGTGTTGCCAAAGAAGGTGATACGATGACCGGCACTCTTTGGATTAATAAAGATGCTGCTGGAATAGTTCTTAATCCTCCTTTGGCCAGTGATTCATCATTTATTCGTTCTGATACGGCCGGGGCCAATAATTGGTATATTGGTAAAGGCGGTGCCGACAATGGTCTAGGTTTTTACAGTTACATTACACAAGGCGGTGTATACATAACAACTAACGGTGAAATATCGCTTTCTCCTCAAGGCCAAGGAACATTTAATTTTAATAGAGACCGCCTCCATATAAACGGTACACAATGGACCGCACACCAGGGCGGTGACTGGGCTAACCAATGGCGCCAAGAAGCTCCTATATTTGTAGATTTTGGTAATGTCGGTAATGATAGTTATTATCCTATTATTAAAGGAAAATCCGGTATTACTAACGAAGGATACGTATCCGGCGTAGATTTTGGTATGCGACGCATTACTAATACCTGGGCACAAGGTATTATTCGTGTAGGTAACCAGGAAAACGGTTCTGACCCCCAAGCCATCTATGAATTCCATCATAATGGTGTTTTTTATGCCCCTAGCTTACTTAAGAGCAGCAGAGTATCAGCAGGCGGCGGTGACCCTGCATGGGCCGGGCCGTGTATTGTACTGGGAGATAACGATACCGGTTTGCTTTGGGAAAACGATGGTATTTTCAACGCATATGCAAACGGCCAAGGTGTGTTTAGTTTTAGACCTGGTTTAGCTCAGACATTCGGTGATGTTAACTTCCACTGTAATGCAGGTATGTATGTTCGTGATAACATCGATGTTAACGACGTTTATATTCGTTCTGATATTCGTTGTAAGTCAGAAATTAAGCTTATAGAGAATGCCCAAGAGAAATCTAAACTATTGGGCGGTTATACTTATCTGCTTAAAAACTCTGTTACAGACGAAGTTAAACCGTCCGCAGGTTTAATTGCTCAGGAAGTTCAAGAAGTATTACCTGAACTTGTTTCTGAAGATAAAGAGACCGGACTGCTTCGTTTGAACTATAACGGTATTATTGGTTTAAATACAGCTGCAATAAACGAGCATACAGATGAAATCAAGGAATTGAAATCTGAAATTGCCGAATTGAAAGCATTAATTAAATCATTGATAAAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098024 virus tail, fiber Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0019062 virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
fde143e2abca5986fa347f6a53abb0a60d94db6dfab0cee6d0581ea25d222f5f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5378
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50