Protein

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Genbank accession
XPN41236.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIVGVPGWIGESAVNETGQRWMDAAMKAVRVSVPGWMSSMAGQSKEVYYSIGASNSYNKDTLINYLKSQGSTPVVVTITGNIVSSSAGQPCLDFPSSLTNAYVTLIINGGVTVYGRGGRGAQAGNQAGQAGGTAINNGIGTRLRITNNGAIAGGGGGGGAQSTDNGWGGKYVSGGGGGRPFGAGGNNGAAAPGASASLTSPGAGGKMYSGVGYYGGDGGNVGERGKDAVRLSGYSNSPGAAGKAVTGNAPTWTKVGTIYGSRV
Physico‐chemical
properties
protein length:264 AA
molecular weight: 25902,32670 Da
isoelectric point:9,70954
aromaticity:0,07197
hydropathy:-0,18674

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_1679
STR
6–160
DC_1679
XPN41236.1
1 264
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-160 | RBD 161-264
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SP21535
[NCBI] 		3384871 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPN41236.1 [NCBI]
Genbank nucleotide accession
PQ615101.1 [NCBI]
CDS location
range 150660 -> 151454
strand -
CDS
ATGGCAATTGTAGGTGTTCCTGGCTGGATTGGCGAATCTGCCGTGAATGAAACTGGACAACGCTGGATGGATGCTGCAATGAAAGCAGTTCGTGTTTCAGTTCCTGGTTGGATGAGCTCAATGGCTGGGCAATCTAAAGAAGTATATTACAGTATTGGCGCTAGTAATTCATATAATAAAGACACGCTAATAAATTATCTCAAATCTCAAGGTAGTACTCCTGTTGTTGTTACTATTACAGGAAATATTGTTTCTTCATCAGCTGGGCAACCTTGCTTAGATTTTCCTAGTTCATTAACTAATGCTTATGTAACGCTTATTATAAATGGTGGCGTAACAGTATATGGTCGTGGTGGTCGTGGCGCGCAAGCGGGAAACCAGGCAGGCCAAGCTGGCGGTACTGCAATTAACAATGGTATAGGTACTCGTCTACGAATCACTAACAATGGAGCGATTGCTGGCGGTGGTGGCGGTGGTGGCGCCCAATCAACTGATAATGGATGGGGAGGTAAATATGTTTCTGGCGGTGGCGGTGGACGTCCTTTCGGAGCTGGTGGCAATAATGGCGCAGCAGCCCCGGGCGCATCGGCATCTTTAACATCTCCAGGTGCAGGCGGAAAAATGTATTCCGGCGTTGGATACTACGGCGGCGATGGCGGTAACGTTGGTGAACGAGGTAAGGATGCGGTTAGATTGAGCGGCTATTCGAACTCACCTGGCGCAGCAGGTAAAGCTGTTACTGGTAATGCTCCAACTTGGACTAAAGTTGGTACAATATATGGTTCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62094b71d588361a6995d8e72d53f4348292df0101339fc7fd4305da03e756c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8609
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50