Protein

View in Explore
Genbank accession
URN70890.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MVTKTVIPTDITKLKNESLNKNNNLSDLADRAAAWLNVRPIGSTPLAGDPVGDYDAATKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGAIDDSVWLADKFQRGRYSSGDGTTTFRVPDKNGVQEGSIRALYGRGDGGNSGANGQLFESAAPNITGFFTTYASQTYAQVLGHTGGCFNANNNAFPDGRGDGIAPGSTALSGRYNTCEFNASISSPIYGASTDEILTRNFVGVWVIRASGGFVAANTSWSVINADKTTPNSGVVVFGGSVKSEYKSPSANVVAELKSSKVVNGAWGVSLTISDDRGIPVSIKYDSNGQFSTSHRPAGVGTGNSYSHCAYRAPDWWNNTAYSAFVPILGGGSGNSLKNYRSFACFGQISYPDSSNSYPRAAIAQVRDWALPDGEQGNGKSITVFTFIDNSFDIQYGYNDGSLNYIFSKSPICDERLKKNIQSIDTNIAISNIKQMPYKSYIYKNDENEQVRRGFIAQDLQKIDPQYVREYGDPGREKTLAIDENVMLLDSVAAVKWLINKVEELQEEINILKAK
Physico‐chemical
properties
protein length:576 AA
molecular weight: 62634,74360 Da
isoelectric point:5,63044
aromaticity:0,10417
hydropathy:-0,40347

Domains

Domains [InterPro]
Coil
Unmapped
11–31
Coil DC_2049 DC_0203
DC_1514
STR
18–185
DC_1514 IPR030392 Coil
URN70890.1
1 576
Architecture
STR
RBD
STR 18-385 | RBD 430-576
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URN70890.1
1 576
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,3046
Central domain 288 486 200 0,1512
C-terminal 487 576 89 0,9959
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-486
C-terminal
487-576

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC105
[NCBI] 		2936940 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URN70890.1 [NCBI]
Genbank nucleotide accession
ON185582.1 [NCBI]
CDS location
range 79471 -> 81201
strand -
CDS
ATGGTAACTAAAACAGTAATTCCTACGGATATTACAAAACTTAAAAATGAGTCACTTAATAAAAATAATAACCTGAGTGACTTAGCAGACCGTGCAGCAGCGTGGCTAAATGTAAGACCTATTGGTTCAACCCCTCTTGCTGGTGATCCTGTTGGGGATTATGATGCCGCAACTAAACGTTGGGTAGAGAATAAGATTAACACTGGTACAGTTGGACCCACTATGAATGGTGTTATGAACTACGGTGTTGGTGATTTTCACCTCCGAGATAGTCGTGCGTATATTCAACCATACGAAGTCGTTTCGGATGGACAGCTTCTTAATAGGGCTGACTGGCCTGAACTTTGGGCGTATGCACAAATGGTTGGGGCTATAGATGATTCAGTTTGGTTAGCAGATAAATTTCAGCGTGGCAGATACTCATCTGGGGATGGGACAACAACCTTTCGTGTTCCAGATAAGAATGGGGTGCAGGAGGGATCAATACGTGCTCTTTATGGCCGTGGAGATGGTGGGAATAGTGGTGCAAATGGGCAACTGTTCGAATCCGCTGCGCCTAATATTACAGGTTTTTTCACCACATATGCCTCTCAAACCTATGCCCAGGTATTAGGACATACAGGTGGTTGCTTTAATGCAAACAATAATGCGTTTCCTGACGGAAGAGGTGACGGAATCGCTCCAGGGTCTACAGCTTTATCTGGGCGTTATAATACCTGCGAATTCAATGCCTCAATATCAAGTCCGATTTACGGGGCATCAACAGATGAGATTCTTACACGAAACTTTGTCGGTGTGTGGGTAATCCGTGCTTCTGGTGGGTTCGTGGCTGCTAATACCTCGTGGAGTGTTATTAATGCGGATAAAACAACCCCCAATTCAGGTGTTGTCGTTTTTGGAGGTAGTGTTAAATCTGAGTATAAATCACCCAGTGCAAATGTAGTAGCGGAACTAAAATCAAGTAAAGTGGTTAATGGTGCATGGGGTGTTAGTTTAACTATATCAGATGATAGAGGAATCCCTGTAAGCATTAAGTATGACAGTAATGGTCAGTTTTCAACATCTCATAGGCCGGCCGGAGTCGGTACAGGGAATTCCTATAGTCACTGCGCTTATCGCGCGCCAGACTGGTGGAATAACACAGCGTATAGTGCCTTCGTTCCAATTCTTGGGGGTGGTAGCGGTAATTCACTAAAAAACTATAGATCTTTTGCTTGTTTTGGACAAATATCTTATCCTGATTCTAGCAATAGTTATCCTAGAGCTGCAATTGCTCAAGTAAGGGATTGGGCACTGCCAGATGGTGAACAAGGTAATGGCAAGAGTATTACCGTGTTTACATTTATTGATAATTCATTTGATATTCAATATGGGTACAACGATGGTTCGTTAAATTATATTTTTTCAAAATCTCCGATTTGTGATGAAAGACTAAAGAAAAATATTCAGTCCATCGATACTAATATTGCAATAAGTAATATTAAGCAGATGCCCTATAAATCATACATCTATAAAAATGATGAGAATGAACAAGTGAGGCGCGGTTTTATAGCCCAGGATTTACAGAAAATAGATCCCCAATATGTACGGGAATACGGAGATCCAGGAAGAGAGAAAACGTTAGCCATCGATGAAAATGTTATGTTGCTTGATTCCGTTGCTGCGGTTAAGTGGCTTATTAATAAAGTTGAAGAATTGCAAGAAGAAATAAATATATTGAAAGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f3d39317944000ec8f76c41047f1678d9157b9d1f7909c248c34e4a83007511
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50