Protein

View in Explore
Genbank accession
QBX28547.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MYEFNDTIRGTPKVTFNLKTTIGGKVLEDELNNGFGTFRTLTVSGRDVVDLEHQTTSVLGRNGEYFHNATVEVRKLEIKAKISGKDNKSMRLQYEKLNKLIVSHNQVFLSFSDEPDRNYLGIFKSKDVPEEVSNEQIIGLVFICYDPFKMSGIKTKKGDVVQNDGLFNTKPIITLNLSSSTEEIKLLHVESQKYIRLTGTYTIDEIKIDMATGKITQNGRNILGDLDMVNSRYFELRPGVNTLKCDNATITAEFREVYL
Physico‐chemical
properties
protein length:259 AA
molecular weight: 29380,12170 Da
isoelectric point:6,46131
aromaticity:0,08494
hydropathy:-0,39459

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–150
G3DSA:2.40.30.200 G3DSA:2.60.120.860
IPR008841
STR
30–134
IPR008841 IPR054738
IPR006520
Unmapped
38–149
IPR006520
DC_1533
STR
75–258
DC_1533
QBX28547.1
1 259
Architecture
ATT
STR
ATT 1-150 | STR 151-258 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX28547.1
1 259
Domain Start End Length (AA) Confidence
N-terminal 1 257 257 0,8777
Central domain 258 257 1 0,0461
C-terminal 258 259 1 0,8746
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-257
Central
258-257
C-terminal
258-259

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan456
[NCBI] 		2548179 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pyogenes
[NCBI] 		1314 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX28547.1 [NCBI]
Genbank nucleotide accession
MK448946.1 [NCBI]
CDS location
range 33299 -> 34078
strand +
CDS
ATGTACGAATTTAACGATACTATCAGAGGTACTCCGAAAGTTACTTTTAATTTAAAGACAACAATTGGTGGAAAGGTATTAGAAGACGAACTCAATAATGGTTTCGGTACCTTTAGGACATTGACTGTTTCTGGTCGTGATGTGGTGGACTTAGAACATCAAACAACAAGTGTGTTAGGACGAAACGGAGAGTATTTCCACAATGCCACAGTTGAAGTCAGAAAACTAGAAATAAAAGCTAAAATCAGTGGAAAAGATAACAAGTCAATGCGTTTACAATATGAAAAATTAAACAAATTAATTGTTAGTCACAATCAAGTTTTTTTATCATTTTCAGACGAACCTGACAGAAATTATCTAGGCATCTTTAAATCTAAAGATGTCCCAGAAGAAGTTTCTAACGAACAAATTATTGGCTTGGTTTTTATCTGTTATGATCCATTTAAAATGTCTGGTATAAAAACCAAAAAAGGGGATGTTGTTCAAAATGATGGCTTATTCAATACAAAACCTATCATCACTCTCAACCTCTCATCATCAACAGAAGAAATCAAGCTGCTACATGTCGAAAGTCAAAAGTATATCAGACTGACTGGTACTTATACCATTGACGAAATCAAGATTGATATGGCCACAGGTAAAATTACCCAGAACGGCCGCAACATCCTTGGCGATTTAGATATGGTTAACAGTCGCTATTTTGAATTGAGACCAGGTGTAAACACCTTAAAATGTGACAATGCCACCATAACTGCAGAGTTTAGGGAGGTTTATCTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e250d340f61a8579b3afb59b23af393967f6182c3a80b671f7e6d2518ef04b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9438
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank