Protein

View in Explore
Genbank accession
QZI86417.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MADLNHSTLTDDKLHQPKGASTASLNQVLTSNGDGTTRFADLPEELFTVLDDISSESVVSQTLDTAGTELQVAFGAAATSPNGSVSIATDGTITFLEDGVYYVNVRALAGRSVSTSTSTLGFSGRANGTQVGSTVPITLDNAADGFNISVADTSVVEVTAGTTYSYHMRLFDDGGGDNGIFFVDYATAGWNNTPSARISIRKIGLA
Physico‐chemical
properties
protein length:206 AA
molecular weight: 21358,08470 Da
isoelectric point:4,27818
aromaticity:0,07282
hydropathy:-0,04563

Domains

Domains [InterPro]
DC_0963
STR
1–206
DC_0963
QZI86417.1
1 206
Architecture
STR
STR 1-206
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PS35B.3
[NCBI] 		2859298 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86417.1 [NCBI]
Genbank nucleotide accession
MW865307 [NCBI]
CDS location
range 5742 -> 6362
strand +
CDS
ATGGCAGACTTAAATCACTCCACGTTAACGGATGATAAACTTCACCAACCTAAAGGTGCTTCTACAGCTTCTTTAAATCAAGTGTTAACATCTAACGGTGACGGCACTACACGTTTTGCAGATCTCCCTGAAGAACTGTTTACAGTGCTAGACGACATCTCTTCAGAGAGTGTAGTGAGTCAGACACTTGACACAGCCGGCACTGAGCTACAAGTAGCGTTCGGTGCAGCAGCAACTTCCCCTAATGGCAGTGTATCTATTGCAACTGATGGTACTATCACCTTCCTCGAAGATGGTGTATACTATGTTAATGTTCGAGCTCTTGCAGGTAGGTCAGTATCCACTTCAACATCTACACTTGGTTTCTCAGGTCGAGCTAACGGTACACAAGTAGGCTCTACTGTTCCAATCACCTTGGACAACGCAGCTGATGGTTTCAACATTTCAGTAGCGGATACGAGCGTAGTCGAAGTAACAGCAGGTACAACTTACTCCTACCATATGCGTCTATTCGATGATGGTGGTGGTGACAACGGTATATTCTTTGTTGATTACGCTACAGCAGGTTGGAACAACACCCCTTCTGCACGTATCTCAATCAGGAAGATAGGGCTTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
27a2f5bd638ddc2f14f82a17632e763280232d5f0a3ba85601022161929f3437
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7372
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank