Protein

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Genbank accession
YP_010682294.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQQTEAEGRLNLYDDVTPLEKTKNINVLTAAIRKKTRGADVREAIATSIETTYADSIANGNTNMEVAKARGTYNTLGDRLENFNTEIRNIVSCSPKGIYANLSELQSAKPNGDSGIYLTTDNGHWYYYANGWKDGGMYQAAGIADGSVKFSSIDKKDFNVQFDPKLKVVYKPNLNSWMNADNPTENATKIYMIPFRGAGKVTVSFYGSLFPGVKSQIKLVKKATNSSNYCVSLNEKTITETTEGGYTTITFNHPVPKGEYFIAFCGINFRWNFGYSYWLESSSGYNQSIFLQRKTENRCIDAVIACDFSVDSSGEKLLDENMHFDSGIFSSHTEPILYIPNYELPIGTKSIILGTKNNTPVFIFRKNENNTFEKIKQIYTEEIGEGARYRKYFLDIVAEKDMYVGVFGNVYYDTSGDVSAKKGHFEKDISASDSENIGSMYFNPNTNIHMVPILYYDENLINVAQKNANSFEEINGSLIDITNKINKINKKTITLTNIIRKMKRGNAVTISLYGDSTYYGHKSGAVPLGTRTSEPVSESLQKYLRAYFLNENITVNNYATNGRQAQQDSDDWDTKMANDKADVIFINFGINDSNSGKTAETFYSQMETLVQGALKTNKAVILETANQVLTFDKGSQGMGDYTKAFNIKEFVDVTRQLVKSYNIYLLDGYKRSLSYINEFFDPTIALPDGMHPSDDMYKYKAVQMMSMFTNTSFSKLKSGQTLSILEANFNTTTPNAVADSSSKFGFKYTVKDISVSFGLEKQSDIKIYIKSTASMKVYVNGLDTQYISSDGYIVIKNIHSNDVFIQITSDEATDVYGLEVV
Physico‐chemical
properties
protein length:821 AA
molecular weight: 92010,20410 Da
isoelectric point:5,90008
aromaticity:0,11571
hydropathy:-0,42144

Domains

Domains [InterPro]
DC_0719
STR
1–798
DC_0719
IPR051532
Unmapped
468–697
IPR051532
IPR036514
STR
508–719
IPR036514
SSF52266
STR
508–707
SSF52266
cd00229
ENZ
510–706
cd00229
IPR013830
ENZ
513–698
IPR013830
YP_010682294.1
1 821
Architecture
STR
STR 1-798 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010682294.1
1 821
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,9928
Central domain 157 382 227 0,6428
C-terminal 383 821 438 0,3103
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-382
C-terminal
383-821

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SW19
[NCBI] 		2419639 No lineage information
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010682294.1 [NCBI]
Genbank nucleotide accession
NC_071060.1 [NCBI]
CDS location
range 16853 -> 19318
strand +
CDS
ATGCAACAAACAGAAGCAGAGGGACGTTTGAACCTCTACGATGATGTGACGCCGTTGGAAAAAACCAAAAACATTAATGTTTTGACAGCGGCTATCAGAAAAAAAACAAGAGGGGCAGATGTCCGTGAAGCCATCGCTACGTCTATTGAAACGACTTACGCAGATAGTATCGCTAACGGAAATACCAACATGGAAGTCGCTAAGGCAAGAGGAACATATAATACTCTAGGAGATAGACTTGAAAATTTTAATACTGAAATCAGGAATATTGTAAGTTGTTCACCAAAAGGAATATATGCTAATCTATCAGAGCTACAATCGGCTAAGCCGAACGGAGATTCCGGAATCTATCTCACAACAGACAACGGCCATTGGTACTATTATGCTAACGGTTGGAAAGATGGTGGCATGTATCAGGCGGCGGGGATTGCTGATGGAAGCGTGAAGTTTTCTTCAATCGATAAAAAAGATTTTAACGTTCAGTTTGACCCGAAATTGAAAGTCGTATATAAGCCAAATTTAAATTCTTGGATGAATGCAGATAATCCCACCGAGAACGCCACAAAAATTTATATGATTCCATTTAGAGGCGCAGGCAAAGTGACCGTTAGTTTTTATGGATCCCTGTTTCCTGGCGTAAAATCGCAAATAAAGTTAGTCAAAAAGGCTACTAATTCAAGTAATTATTGTGTGTCTCTCAATGAAAAAACCATAACTGAAACGACAGAAGGCGGATATACAACAATTACGTTCAATCATCCAGTTCCTAAAGGCGAATATTTTATCGCTTTTTGTGGAATTAATTTCAGATGGAATTTTGGATATAGTTATTGGTTAGAAAGCTCTTCAGGTTACAATCAGTCGATTTTTTTACAAAGAAAGACAGAAAATAGATGCATAGATGCTGTTATTGCTTGTGATTTTTCTGTTGATTCTAGCGGTGAGAAATTATTAGACGAAAATATGCACTTTGATTCAGGTATATTTTCGTCTCACACTGAACCTATTTTATATATTCCTAATTACGAATTGCCTATCGGAACAAAATCTATAATTCTTGGGACTAAAAACAATACACCTGTTTTCATTTTTAGAAAAAATGAAAATAATACGTTTGAAAAAATAAAACAAATATACACAGAAGAAATAGGTGAAGGAGCACGTTATAGAAAATACTTTTTAGACATTGTTGCTGAAAAAGATATGTATGTCGGAGTTTTTGGAAATGTTTATTATGATACTTCTGGTGATGTTTCTGCAAAGAAAGGACATTTCGAAAAAGATATTTCGGCTTCAGATTCTGAAAATATAGGGTCAATGTATTTCAATCCAAATACAAATATTCACATGGTTCCTATTTTATATTATGATGAAAATTTAATTAATGTTGCACAAAAAAATGCGAATTCATTTGAGGAAATAAATGGATCGCTAATTGATATCACCAATAAAATAAATAAAATAAATAAAAAAACAATAACATTAACAAACATAATCAGAAAAATGAAAAGAGGGAATGCAGTCACTATTTCGCTTTACGGAGACTCAACGTACTATGGTCATAAGTCAGGCGCTGTCCCTTTAGGCACTAGAACAAGCGAGCCTGTTTCTGAAAGTTTGCAAAAATATCTACGTGCTTATTTTTTGAACGAAAATATAACAGTAAACAACTATGCAACTAACGGAAGACAAGCACAACAAGATTCAGATGATTGGGACACAAAAATGGCTAATGACAAAGCGGACGTTATTTTTATAAATTTCGGGATAAACGATTCAAATTCCGGTAAAACAGCAGAAACTTTTTACAGTCAAATGGAAACTTTAGTACAAGGTGCGCTGAAAACGAACAAAGCAGTCATCTTAGAAACTGCTAATCAAGTCTTAACTTTTGACAAAGGAAGTCAAGGGATGGGAGACTATACGAAAGCTTTTAACATTAAAGAATTTGTTGATGTAACAAGACAGTTAGTTAAGAGTTATAATATTTATTTGCTTGATGGATATAAACGTTCATTAAGCTACATTAACGAATTTTTTGATCCCACAATAGCTTTGCCGGACGGCATGCATCCGTCAGACGATATGTATAAGTATAAAGCTGTTCAAATGATGTCTATGTTTACTAATACGAGTTTTTCAAAATTAAAATCAGGACAGACATTATCTATTTTAGAAGCTAATTTTAATACAACAACACCAAATGCAGTAGCGGATAGCAGTTCTAAATTCGGTTTTAAATATACGGTTAAAGACATCTCGGTATCATTTGGACTAGAAAAACAATCAGATATTAAAATTTATATCAAAAGCACAGCATCAATGAAAGTTTATGTTAATGGTTTAGATACTCAATATATTAGCTCTGATGGATATATCGTAATAAAAAATATTCACTCTAACGATGTATTCATTCAGATCACTTCAGACGAAGCGACAGATGTTTATGGTTTAGAAGTGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c7d2377af9068ff442f290cd705c122a675b734710067f2a9b7562ed83b82b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7026
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Biodiversity of Streptococcus thermophilus Phages in Global Dairy Fermentations Lavelle,K., Martinez,I., Neve,H., Lugli,G., Franz,C., Ventura,M., Bello,F., Sinderen,D. and Mahony,J. 2018 — GenBank