Protein

View in Explore
Genbank accession
QBJ03767.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MEYGIIKNTLIENGTLNGADLSGSNLRDVDLHNANLVQGDLSFSNLNGANLSNANLKGTDLSGVYLSDANLINTNLIKVNFNDADLCNADLRGADLRNANFSNADLKNANLSGANLKGANLIYANLDGANLNGANLTGVNLNEAFNLKVK
Physico‐chemical
properties
protein length:150 AA
molecular weight: 15779,25900 Da
isoelectric point:4,58807
aromaticity:0,04667
hydropathy:-0,21000

Domains

Domains [InterPro]
G3DSA:2.160.20.80
STR
5–82
G3DSA:2.160.20.80 G3DSA:2.160.20.80
SSF141571
STR
8–144
SSF141571
SSF141571
STR
20–144
SSF141571
PTHR47485
Unmapped
40–144
PTHR47485
IPR001646
STR
41–76
IPR001646 IPR001646
QBJ03767.1
1 150
Architecture
STR
STR 5-149 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBJ03767.1
1 150
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,7361
Central domain 33 139 108 0,9516
C-terminal 140 150 10 0,8529
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-139
C-terminal
140-150

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage ATCCB
[NCBI] 		2510944 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus brevis
[NCBI] 		1580 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ03767.1 [NCBI]
Genbank nucleotide accession
MK504445 [NCBI]
CDS location
range 56228 -> 56680
strand +
CDS
ATGGAATATGGAATTATTAAAAACACGCTTATTGAAAATGGTACATTAAACGGTGCTGATTTAAGTGGTTCTAACTTACGTGATGTTGATTTACATAATGCAAATTTGGTACAGGGTGATTTAAGTTTTTCAAATTTAAATGGCGCTAATTTAAGTAATGCTAATTTAAAAGGTACTGACTTAAGCGGTGTTTATTTAAGTGATGCAAATTTGATTAATACAAATTTAATTAAAGTGAATTTTAATGATGCTGATTTATGTAACGCAGATCTACGCGGTGCTGATTTACGTAATGCTAATTTTAGTAACGCAGATTTAAAAAATGCCAATTTAAGTGGTGCTAATTTAAAGGGGGCAAACTTAATTTATGCCAATTTGGATGGAGCAAATTTAAATGGTGCTAACTTAACTGGTGTTAATTTAAATGAAGCATTTAATTTAAAAGTAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
85ad8ddf75cf34c29a8156b282555261cb63cfec45e70368c75e0c3fcdd19baa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8679
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of virulent Lactobacillus brevis phages Feyereisen,M., Mahony,J., O'Sullivan,T. and van Sinderen,D. 2019-04-26 — GenBank