Protein

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Genbank accession
QXV79284.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MPPAIIGAVVAIGAAAGAAAGIITATTALVIGIAASAAGALLTKTQSFNFDSYTPQSERKQVIRAAAASRTVIYGTTVSSGVLVFAEEEPGVQEPDKHGENHEKLTLVLALAGHELTEVGQVWLGDDAIESFGDKASYVIHNNPTTVSRDMLNRCPSWKSDMIGKGICWMQLNLVFDSEKFPSGLPNVKCLKKGRKVLDPRTGNMIFSNNAALVILDYLRVYLKRSDDAILWDQFKEAANICDESVKNADNTFEPRYTINGEFDIDEASSKILEDMLDSCGGELTYIGGKHGLLVGAYYGPPELTLDTSCIAGDIKITPETAFKERTNTITGTYIDPLQNYQEADFPPVSVAEWIKQDGQEITQDVDYRFVTSPYQAQRLSNLTLKRKRIGRSIEIPCNMRGYRFRPGMYVYVDIPNIGMNKVEMRVIKWQFDPKGGVTVTVRQDFPDLWDDAIGKPVERPDLVDLPTGGAMQPQNLQYEVLQISDVVQGVLSWQNIMAVAYNNVVIKKDGTTVLTVQVPGQSTRITGLIRGAYTAHVKAVAYTGATSPEAYLEFNIQAPSAPTSVEVKQGYFAVTLKPKSADLANVSTQYDFWTSGETRLPSTAVDVVERQATRAGMGTTWTSEGLLNDHTYYWYVRAINAFGSSSFVEVAARCFTDAAGLIPQIDTEFKGTNTYKELMAEIGSVSDGVKSYVDDQIETSEGRLTQTIDTVQQSVVLVDGKVQQQGVTINKQGQLIDAQGKLIETNGRQINVVKATVQEVSKSVVDLEGKVNAQWGAKIQVDSKGQKYVAGIQLGMEGSGGAIQSYFMVNANNFAIYNPTNSTADLAFAVKNGQVFMKATFIENGSIDNAKIGNYIQSNNYAAGSAGWRITKDGASEFNNVIVRGEIYAAVGKFGFNGNGGITINSNGITVPLSGGGKVVVGRW
Physico‐chemical
properties
protein length:925 AA
molecular weight: 100393,24190 Da
isoelectric point:5,22637
aromaticity:0,08541
hydropathy:-0,17200

Domains

Domains [InterPro]
DC_0754
STR
1–924
DC_0754
IPR013783
STR
556–656
IPR013783 IPR053171
IPR057587
ATT
562–666
IPR057587 IPR015406
QXV79284.1
1 925
Architecture
STR
ATT
STR
STR 1-561 | ATT 562-666 | STR 667-924 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV79284.1
1 925
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,9009
Central domain 21 219 200 0,1080
C-terminal 220 925 705 0,1849
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-925

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage FritzHoffmann
[NCBI] 		2851984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV79284.1 [NCBI]
Genbank nucleotide accession
MZ501068.1 [NCBI]
CDS location
range 15792 -> 18569
strand +
CDS
ATGCCACCAGCAATAATTGGAGCCGTAGTTGCTATCGGGGCAGCGGCTGGGGCAGCGGCAGGTATTATCACAGCCACTACCGCGCTTGTGATTGGTATTGCTGCCAGTGCCGCTGGAGCTCTACTTACAAAGACTCAAAGTTTCAACTTTGATTCCTACACACCTCAGAGCGAACGTAAGCAGGTTATTCGTGCCGCTGCTGCATCTAGAACTGTGATTTATGGGACAACTGTGTCCAGTGGTGTTCTTGTATTTGCGGAAGAGGAACCAGGAGTACAGGAACCAGATAAACATGGCGAGAACCATGAAAAGTTGACGTTGGTTCTTGCATTAGCCGGACACGAACTAACAGAAGTAGGACAAGTGTGGTTAGGGGATGATGCTATCGAAAGTTTTGGTGATAAAGCGTCATATGTAATACATAACAATCCTACTACCGTTAGTCGAGATATGCTGAATCGTTGCCCATCATGGAAAAGTGACATGATTGGTAAAGGTATTTGCTGGATGCAATTAAACCTTGTGTTCGATTCTGAAAAATTCCCTTCTGGCCTACCTAACGTTAAATGCCTTAAGAAAGGTCGTAAAGTATTAGATCCTAGAACTGGTAATATGATATTTAGCAATAACGCAGCTTTAGTCATTCTGGATTACTTGCGAGTGTACTTAAAGCGTTCTGATGATGCAATTCTTTGGGACCAGTTCAAGGAAGCTGCTAATATATGTGATGAAAGTGTGAAGAACGCGGACAACACATTTGAACCTCGTTACACCATAAATGGTGAGTTCGATATTGACGAAGCTTCATCTAAGATCCTGGAGGATATGCTTGACTCTTGTGGTGGGGAGTTAACTTATATTGGCGGTAAACATGGTTTATTAGTTGGTGCTTATTACGGTCCACCTGAACTAACACTTGACACAAGTTGTATTGCTGGTGATATTAAAATCACACCTGAAACAGCTTTTAAAGAACGCACCAATACAATCACAGGTACTTATATAGATCCTTTGCAGAACTATCAGGAGGCAGACTTTCCTCCTGTAAGCGTTGCGGAATGGATAAAACAAGACGGGCAAGAAATCACACAAGACGTAGACTATCGTTTTGTAACAAGCCCATATCAGGCACAACGTTTGTCTAACTTAACATTGAAACGCAAACGCATTGGTCGTTCCATCGAGATACCATGTAACATGCGTGGGTATCGTTTCCGTCCAGGAATGTATGTTTACGTTGACATTCCTAATATTGGAATGAACAAAGTAGAGATGCGTGTCATTAAGTGGCAGTTTGATCCGAAAGGTGGTGTCACTGTAACTGTACGCCAAGACTTCCCGGACTTATGGGACGATGCAATTGGCAAACCTGTAGAGCGACCAGATCTAGTGGATTTACCTACTGGTGGCGCTATGCAACCTCAGAACCTACAATATGAAGTCTTACAAATTAGCGACGTTGTACAGGGTGTTCTGTCGTGGCAAAATATAATGGCTGTAGCCTACAACAACGTAGTAATTAAGAAAGATGGTACTACCGTATTGACGGTGCAAGTACCGGGCCAGAGCACGCGGATTACGGGGCTTATTCGCGGCGCTTATACAGCACATGTGAAAGCTGTGGCGTATACCGGCGCAACAAGTCCAGAAGCATATCTTGAATTTAACATTCAAGCACCTTCCGCTCCCACATCTGTTGAAGTAAAACAAGGCTACTTTGCAGTGACACTGAAACCAAAATCTGCAGATCTAGCGAACGTTAGTACACAATATGATTTCTGGACGTCCGGTGAAACAAGACTACCATCCACCGCTGTAGACGTGGTAGAGAGACAAGCCACCCGTGCTGGTATGGGTACAACGTGGACTTCAGAAGGGTTACTTAATGACCACACTTATTACTGGTACGTGCGAGCAATCAATGCTTTTGGTTCTTCTTCATTTGTAGAGGTGGCTGCAAGATGCTTCACAGATGCTGCTGGCCTTATTCCGCAGATTGACACAGAGTTCAAAGGTACTAACACCTATAAAGAACTTATGGCTGAGATTGGAAGCGTCAGTGATGGTGTTAAGAGTTATGTGGACGACCAAATTGAGACCTCTGAAGGGCGCTTAACTCAAACAATAGATACAGTGCAACAATCTGTAGTTCTTGTTGACGGTAAAGTGCAGCAACAAGGCGTCACAATTAATAAACAGGGGCAGTTAATAGATGCTCAAGGTAAGTTAATCGAGACAAACGGCCGACAAATTAATGTGGTCAAAGCTACCGTACAGGAAGTCAGTAAGTCCGTTGTAGATCTTGAAGGTAAAGTCAACGCTCAGTGGGGCGCCAAGATCCAGGTGGATAGTAAAGGACAGAAATATGTTGCTGGTATTCAGTTAGGTATGGAAGGTTCCGGTGGAGCTATCCAATCTTACTTTATGGTCAACGCCAACAACTTTGCTATCTATAACCCAACTAACAGCACAGCGGATTTAGCATTTGCAGTTAAGAACGGTCAAGTGTTTATGAAGGCGACGTTCATTGAGAACGGGTCTATTGATAATGCCAAAATCGGCAACTATATCCAGTCCAACAACTATGCAGCTGGTTCTGCTGGCTGGAGGATTACCAAGGACGGAGCTTCGGAGTTTAATAATGTTATCGTCAGAGGTGAGATATATGCAGCGGTTGGCAAATTCGGATTCAACGGAAATGGAGGTATAACAATCAATAGCAACGGGATTACGGTTCCATTGTCAGGTGGTGGTAAAGTTGTAGTTGGTAGATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7384943dce7d9e7338d583407c7fb809f89cdd3906632014f1bb42181712020
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3050
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank