Protein

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Genbank accession
UOF77818.1 [GenBank]
Protein name
triple helix repeat-containing collagen
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MPFNGSGAFVALSPPNYPAVAGQTILASMFNANMTDLFSGLSNCVTRDGQSPATANLPMGGYKHTNAGAASASGEYLVYGQSGANFASVTLGTGVYSSYNGGDIAAIVTGGATRGSLIEAEANCHLVIGLRENAVSDTFSIVSGGGDYISTSTYDLLCFQVYADGRVKSFNQNYIKLGSSGADPATADADDLVIEGSSNSGMTFMVPDASYSKIAFASTFHGDDGQIRYYAASHQFVFYTDAVSRMTLSSSGLSFGGVLTGDGSGLTALKASAGYVLSDTCTFGGFDVGWRDVPKDTAFTRGKCFETTSNQTLNTGFAAGSCFSIFNNSAAAITITQGAGLTLYGPGGVTGSRTLAARGMATIWCSATNVYKITGEVT
Physico‐chemical
properties
protein length:378 AA
molecular weight: 38814,57490 Da
isoelectric point:4,79797
aromaticity:0,10582
hydropathy:0,08492

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UOF77818.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 78 78 0,3824
Central domain 79 277 200 0,3045
C-terminal 278 378 100 0,9670
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-78
Central
79-277
C-terminal
278-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage sp
[NCBI] 		38018 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOF77818.1 [NCBI]
Genbank nucleotide accession
MW202489 [NCBI]
CDS location
range 18920 -> 20056
strand +
CDS
ATGCCATTTAACGGCTCTGGCGCATTCGTCGCCCTTTCCCCTCCGAACTACCCTGCCGTCGCGGGGCAGACCATCTTGGCCAGCATGTTCAACGCGAACATGACGGACCTTTTCTCCGGCCTGTCCAACTGCGTCACGCGGGATGGGCAGAGCCCGGCCACGGCCAACCTGCCGATGGGCGGGTACAAGCACACGAACGCCGGCGCTGCTTCAGCCTCGGGCGAGTACCTGGTCTACGGGCAGTCGGGGGCGAACTTCGCCAGCGTGACCCTTGGCACCGGTGTGTACAGCTCCTACAACGGCGGGGATATCGCAGCGATCGTCACCGGCGGTGCGACCCGCGGCTCGCTGATTGAAGCGGAGGCGAATTGCCACCTGGTCATCGGCCTTCGTGAGAATGCTGTCAGCGACACGTTCTCCATCGTCTCTGGCGGCGGTGACTATATCAGCACTTCGACTTATGACCTGCTGTGCTTCCAGGTCTACGCCGATGGCCGTGTCAAGAGCTTCAATCAGAACTACATCAAGCTCGGATCCAGTGGCGCCGACCCGGCCACAGCCGATGCGGACGATCTGGTCATTGAAGGCTCATCCAACTCCGGTATGACTTTCATGGTCCCGGATGCGAGCTACTCGAAGATTGCCTTCGCCTCGACCTTCCATGGCGATGACGGGCAGATCCGGTACTACGCCGCCTCCCATCAGTTCGTCTTCTACACCGATGCGGTTTCCCGGATGACGCTGAGCTCATCGGGGCTTTCCTTCGGCGGGGTGCTGACTGGTGACGGTTCCGGCCTCACCGCGCTCAAAGCCTCGGCCGGCTATGTCCTGAGCGACACCTGCACCTTCGGCGGCTTCGACGTCGGCTGGCGGGACGTGCCGAAGGACACTGCCTTCACCCGCGGGAAATGCTTCGAGACCACCAGCAATCAAACCCTCAATACCGGGTTCGCCGCAGGCAGCTGCTTCTCCATTTTCAACAACAGCGCAGCGGCCATCACCATCACCCAGGGCGCAGGCTTGACCCTCTATGGCCCTGGCGGCGTGACCGGCAGTCGCACCCTGGCAGCCCGCGGCATGGCTACTATCTGGTGCAGCGCGACTAACGTGTACAAGATCACTGGTGAGGTGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4948aa610693cec46d9c92e5958e0534ef67b5a151e42bfefb2095a0d9ab20b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6462
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50