Protein

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UniProt accession
A0A1B1PED9 [UniProt]
Protein name
Tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,54
Protein sequence
MAFDGAIKSLMQGVSQQVPRERLDGQVSVQLNRLSDVVNGNRRRPGARYLSTLPITANFNNRVFATYVDVADATNHVLVNTEDGQLVVLSEDFGTVLHTGTYPYLQASNANAIQTGTLRGDLYLANTQQAPTLVHGTTTQQDPTKTGFFFVRVPAFSKDYDITLSNSTGTYTYTHRTPNGQGGGDADLAKPSYVVSQLVTLINAETGTHGITAHAFDAYMYLVSATATLSATTNAGSTYATASNQSRVTLLSDLPARLPTIADGVLCAVGTTPRSFTWYEYETSTSVWKEAGAYGSPTGFSGMPIKLSLDGTYTVSTPEYEGRLAGSDITNEDPGFIEHGLTGFGVYQGRLVILAGPEVCMSAAGMPERWYRSTVTSLLTEDPINVFSGAATTTNFSHCVQFNKDLLLFSRSCQAVVPSSNAAITPATAQIVITSQYTTDTLAAPTVVGRSVLYPMPRTESFAGILEMIPSNTTDSQYTSNDVTAHIPRYMPGSIRSITASTTSNSSVLLCTGDDRSLFIQDYLWSGDEKVQSAWHQWSVPYPIVCAWFVRDRVYLGMRDGTSIVVGTIEPQAGTTYLSYTRPFSDLYSLVTVAGGLTTVPQHLRSAYLDGAELFLTFADTSKGGMWVGIDSVDTGTWQVQTVRNVPDGQYFLGVRYMSVLTPTPPLVRDANGVVIGTSRTLLVRYELTLKDSGEFHAVVADSSRVLTDGTYSSLVYSNVELLPDEPTSATLGRVVIPVRAQAQETVATFEADADTDLCVLDIEYVLQYRARRKRL
Physico‐chemical
properties
protein length:776 AA
molecular weight: 84069,20560 Da
isoelectric point:5,10274
aromaticity:0,09278
hydropathy:-0,08376

Domains

Domains [InterPro]
DC_0058
STR
1–776
DC_0058
IPR058003
TTP
5–775
IPR058003
A0A1B1PED9
1 776
Architecture
STR
STR 1-776
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1B1PED9
1 776
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9874
Central domain 138 338 202 0,1110
C-terminal 339 776 437 0,1498
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-338
C-terminal
339-776

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP16
[NCBI] 		1873958 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Kotilavirus
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
c8add4c757b884f4c087f2ca49f1882eae801bad71a02627b2bbf903584f7724
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50