Protein

View in Explore
Genbank accession
AQT28066.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQFAYAFDPHAANDDNIVRDEAHVLSATMSPYRVIIPNFAPFFEDLEIEVKCNNKPLLMGVDYYLSHKYFTGIERTGKLMYSGIWIVNPKLSGTVTVKYRTLGGKFPVQRSIIDDYLTNRQTDPQHATWEEVINDDPVFPPVDLQFDRDTFVDEENVQTAIREIADVVRNKDQTTNDMYMLLDDWFLQLKKVVDESPLKTHQDNFNNPHGEVWFESQALHEAGIAKDTAKVAGMTINQLADYVNSRGITQADLDNYVKRSGGNTVVGDIVLKDGLMFIEFLHSNNAYLRINMSNGNIGFDAISDALVHADRDKNSPGAKATLRSGDVELTVTSRGATQTDDDLRINDKTIIHDGNLEAHVPDAGTHIIDIQTKDSVSLNFSGKGVAGNPLKADATLDDATTSVSGIAVGTVDETKDQPTKVALSQGTAKVDAKIKAKVPDTVKINGIRLDRDITLTKDKFGLGNVDNLSDMDMPVNQNHENLLANKAVGDHTHSFAEMGFARATEATYGITFLSDDPTSSATDRGFSAAKLSDLNTEVMDLEFVTSTRLPDDVIDITQYGGNHWLPIPVQGSYEGSGHYQSARQMAGFVEEDGKCIFYRNGYDLVTQGIFYAYATFLSDGSITDYVATATRYRPGTLPEGWEVLYCLRGSRDGMYVRLKDAAGNQHPGVVIFNNSGNGENHKVALLPDNLGVADPTPIIFGNYVYYIGTWVGNGYGIRHAFYRAPLSDFDEFGVANFEEVVISGTDFFNEQQSGSTIVLCRNDWSDDENAEAICIRKDTRYSINPRWNNIGLAMAIKGDLLRIFVKVGSYESSSFDSSRYNWSYSVTVNLATRQLVIDSGRNLPYVFNGRNNYGGNMGANNSQSMGWMNGGNIGAGEISDGKFTAVWHTHNESTPSAGGQKYNNADYFDSLHAANRSIQTIGSRPSLTGNFGSAVGVMQRHVAMLPNRYLHSYSGWNMCKFVPNYTFANGMKGYGPHVDRKYAGDWRKYRHNVYFTNGSDVELAFGGILHKASLSTWTTMDASHNTSGSISTTVEHLDALSAALEPIFEADAGSDTLQGVDVVVYILPDERIPPMWTAVGRFVKASDGAVRSINKVGTLENVPRSGSVGNFRVRGTLGSAGGASRYASYSSPRDYLPNSGIIDDEASGKMLFVLNTNCSFYYGSHTKSFLVEIDYSSGTPDPAHMHNTDMYSYRAGGMMITKDYGLVIPLQHNSFTAITARHIGKTAADWKVFYANKDSYKETVVLHTSQVAEGWVVYFTQDVQFFINSTRFMIPETGLDLSTLFPSTYKSNTFYIYASVEGGVAHYVIKEQYVADSSTEIYIGFCRTTDEKIVDLQVNRATRMGDFREFTEHLTDPKPHGLDLSQVTTDDIGLGLLENKDIRHSLVVPTFKEIFDGWYRLSHQAEKPYPAIPAETTTWSYNAATDSIFNTTNSSSFVGMVSPADVTVGDYDFITGVNSANGDDDWIGVIFAMVEKDGIQHTLTALCSGTDTRNDHFSVHYNWNQTANRGQKTLYSHTTALKHGWDEIPERIITVKRRGDVFTIHVTKMMTDAATERTFSFDVKDHPELAALFRGAVRFGYCAQSQASSTWRNILRPDEDGKNFYASQKLYRDNFSWSSRLKTISGVVAPTVNGGDTDTYDVPIPVEYRDMNYHAWYNIDQSSDSGGGITTMALSHERVGDVIRFTALSHNRGGFYTALLRYNITFFNDVRMI
Physico‐chemical
properties
protein length:1714 AA
molecular weight: 190107,38550 Da
isoelectric point:5,31970
aromaticity:0,10735
hydropathy:-0,36552

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AQT28066.1
1 1714
Domain Start End Length (AA) Confidence
N-terminal 1 533 533 0,7946
Central domain 534 788 256 0,8840
C-terminal 789 1714 925 0,3663
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-533
Central
534-788
C-terminal
789-1714

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pVa-21
[NCBI] 		1958921 No lineage information
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AQT28066.1 [NCBI]
Genbank nucleotide accession
KY499642 [NCBI]
CDS location
range 105089 -> 110233
strand -
CDS
ATGCCACAGTTTGCGTATGCGTTTGACCCACATGCTGCTAACGATGACAACATCGTACGTGACGAAGCGCATGTGCTAAGTGCGACAATGTCCCCGTACCGTGTCATCATCCCTAACTTCGCTCCGTTCTTTGAAGACTTGGAGATTGAAGTTAAGTGCAACAACAAACCGTTGCTCATGGGTGTTGACTACTACCTATCGCATAAATACTTTACTGGTATTGAGCGTACTGGTAAGTTGATGTATAGCGGTATCTGGATTGTCAACCCGAAACTTTCAGGAACGGTAACAGTTAAATATCGCACACTTGGCGGTAAGTTCCCTGTCCAACGTTCAATCATTGACGACTACCTAACAAATCGTCAAACTGACCCACAACACGCAACATGGGAAGAAGTCATTAATGACGATCCTGTGTTCCCACCAGTTGACCTACAGTTCGACCGCGATACCTTCGTAGATGAAGAGAACGTTCAAACTGCAATTCGTGAAATCGCAGATGTGGTTCGTAACAAAGACCAAACGACTAACGACATGTACATGCTGTTGGATGATTGGTTCCTGCAACTGAAAAAGGTTGTGGATGAGTCTCCTCTAAAGACACATCAAGACAACTTCAATAACCCTCACGGGGAAGTATGGTTCGAGTCACAAGCGCTGCATGAAGCAGGTATCGCTAAAGACACGGCTAAAGTCGCTGGCATGACCATCAACCAATTGGCTGACTATGTGAACTCTCGTGGTATCACTCAAGCTGACTTGGATAACTACGTTAAGCGTAGTGGCGGTAACACTGTAGTAGGCGATATCGTACTGAAAGACGGTCTGATGTTCATCGAGTTCTTACATTCAAACAATGCGTATCTGCGTATTAACATGTCGAATGGTAACATTGGTTTCGACGCTATCTCTGATGCGTTGGTTCATGCTGATAGAGACAAGAACAGTCCGGGTGCTAAGGCGACCTTACGTTCTGGCGATGTAGAACTAACTGTAACGTCGCGTGGTGCGACTCAAACGGATGATGACTTGCGTATCAATGACAAGACCATCATTCATGACGGTAACTTAGAAGCGCATGTGCCAGACGCAGGCACTCACATCATCGATATCCAAACTAAGGACAGTGTTTCGCTGAATTTCTCAGGTAAGGGTGTCGCAGGTAATCCGTTAAAGGCTGACGCAACACTTGATGACGCAACAACATCGGTTTCTGGTATTGCCGTAGGTACTGTTGATGAAACCAAAGACCAACCTACTAAGGTGGCGTTAAGTCAAGGCACTGCTAAAGTAGATGCTAAGATTAAAGCCAAGGTTCCAGACACGGTTAAAATCAATGGCATTCGACTTGACCGCGACATTACCCTTACTAAGGACAAGTTTGGTTTAGGTAACGTGGATAACCTGAGCGATATGGATATGCCTGTCAATCAGAACCATGAGAACCTACTGGCGAATAAAGCAGTGGGTGACCACACGCACTCCTTTGCGGAAATGGGCTTTGCGCGTGCTACTGAGGCTACCTATGGTATCACGTTCTTAAGTGATGATCCTACGTCAAGTGCAACTGACCGCGGTTTCTCTGCGGCTAAACTGTCGGACTTGAACACCGAAGTAATGGACTTGGAGTTTGTAACTAGTACGCGCCTACCCGATGATGTAATTGACATCACTCAATATGGCGGTAACCACTGGCTGCCTATTCCAGTCCAAGGCTCGTATGAAGGTTCTGGTCACTACCAGTCGGCACGCCAGATGGCAGGCTTTGTAGAAGAGGATGGTAAATGTATCTTCTACCGTAACGGTTATGACTTAGTTACTCAAGGTATCTTCTACGCGTACGCTACGTTCCTAAGCGATGGTAGTATTACTGACTACGTTGCCACGGCAACGCGTTATCGTCCGGGCACCTTGCCGGAAGGGTGGGAAGTTCTGTACTGTCTGCGCGGTTCTCGTGATGGGATGTATGTTCGTCTAAAAGATGCTGCGGGTAATCAGCACCCTGGGGTTGTTATCTTTAATAACTCAGGTAATGGTGAAAACCATAAAGTGGCCTTGTTACCTGACAATCTAGGTGTCGCTGATCCAACGCCTATTATCTTTGGCAACTATGTGTATTACATTGGCACATGGGTTGGTAATGGTTACGGTATCCGACATGCGTTCTATCGTGCACCACTTTCTGACTTTGATGAATTCGGTGTGGCTAACTTTGAAGAGGTTGTTATCTCAGGTACTGACTTCTTTAATGAGCAGCAGTCGGGTTCTACCATTGTACTTTGCCGTAATGACTGGAGTGATGATGAGAATGCAGAAGCTATCTGTATTCGAAAAGATACACGTTACTCGATTAATCCGCGCTGGAACAACATCGGTTTAGCGATGGCGATTAAAGGTGATTTACTTCGCATCTTTGTTAAGGTCGGTAGTTATGAATCATCGTCATTTGACTCATCTCGCTATAACTGGTCGTACAGTGTAACCGTCAACCTAGCCACACGTCAGTTGGTTATTGACTCAGGCCGAAACCTCCCGTATGTGTTTAATGGTCGTAATAACTACGGCGGTAATATGGGTGCGAACAATAGCCAGAGTATGGGTTGGATGAATGGTGGTAATATTGGTGCTGGTGAAATTAGTGACGGTAAATTTACAGCGGTGTGGCACACTCACAATGAATCTACACCGAGTGCGGGTGGTCAGAAGTATAACAATGCAGATTACTTCGACTCACTACATGCAGCAAACCGTTCTATCCAGACGATCGGTTCTCGACCTAGTTTGACTGGTAACTTTGGTAGTGCGGTTGGTGTAATGCAACGACATGTTGCTATGCTACCTAATCGCTACTTGCATAGTTACAGCGGGTGGAATATGTGTAAGTTTGTACCTAATTACACATTTGCAAATGGCATGAAAGGTTACGGGCCACACGTTGACCGTAAGTATGCGGGTGATTGGCGGAAGTATCGCCATAACGTCTACTTCACTAACGGGTCGGATGTTGAACTTGCTTTCGGTGGTATTTTACATAAAGCAAGCTTATCTACATGGACCACGATGGATGCGAGCCACAATACAAGCGGTAGCATTTCAACCACAGTCGAGCATCTGGATGCGCTCTCTGCGGCACTTGAGCCTATCTTTGAAGCGGATGCAGGTTCGGATACGCTGCAAGGCGTGGATGTGGTGGTGTATATCCTCCCAGATGAACGTATTCCGCCAATGTGGACTGCGGTAGGTCGTTTCGTTAAAGCATCGGATGGGGCTGTTCGTAGTATAAACAAAGTGGGTACGCTTGAAAACGTTCCCCGTAGTGGCAGTGTTGGTAACTTCCGTGTCCGTGGTACGTTAGGGTCAGCAGGTGGTGCAAGTCGTTACGCGTCTTACTCATCGCCGCGAGACTACTTACCTAACAGTGGTATCATTGATGATGAAGCCTCAGGTAAGATGTTGTTTGTGTTGAACACAAACTGTAGTTTCTATTACGGTAGTCACACGAAGTCATTCCTTGTGGAAATCGATTATAGTTCTGGAACTCCTGATCCGGCACACATGCATAACACCGACATGTATAGCTACCGTGCAGGTGGCATGATGATTACCAAAGATTACGGTCTGGTGATTCCTTTACAGCACAACTCCTTTACTGCGATTACTGCACGTCATATTGGTAAGACGGCTGCGGATTGGAAAGTGTTCTACGCTAACAAGGACTCGTACAAAGAAACGGTGGTGCTTCACACCTCACAGGTGGCTGAGGGTTGGGTAGTATACTTCACTCAGGATGTGCAGTTCTTTATCAACAGTACACGATTCATGATCCCTGAAACCGGGTTAGACTTGTCGACGTTATTCCCGTCCACATATAAGTCAAACACGTTTTACATCTACGCGTCGGTTGAGGGTGGTGTAGCGCACTACGTGATTAAAGAGCAGTATGTGGCAGACAGTTCAACAGAAATCTACATTGGCTTCTGTCGTACTACGGATGAGAAGATTGTCGACTTGCAAGTTAACCGTGCAACACGTATGGGCGACTTCCGAGAGTTCACAGAGCACTTAACCGATCCTAAACCACACGGTTTGGATTTGTCACAGGTAACCACCGATGACATCGGTTTAGGTCTGCTTGAGAACAAAGACATTCGTCACTCACTGGTCGTTCCAACCTTTAAGGAGATATTCGATGGCTGGTACCGTTTGTCACATCAAGCTGAGAAACCGTACCCGGCAATCCCTGCGGAGACAACCACGTGGTCGTATAACGCAGCAACTGACTCCATCTTTAACACAACCAACAGCTCTAGCTTCGTTGGCATGGTATCTCCTGCTGACGTTACAGTAGGTGACTATGATTTCATTACTGGCGTTAATTCAGCTAACGGTGATGATGACTGGATCGGTGTTATCTTCGCCATGGTGGAAAAGGATGGGATTCAGCATACGCTGACAGCACTGTGTTCGGGCACAGATACGCGTAATGATCACTTCTCAGTACATTACAACTGGAACCAAACCGCCAATCGTGGCCAGAAAACGTTGTACTCACATACAACTGCTTTGAAACACGGATGGGATGAAATCCCAGAACGTATCATTACAGTTAAACGTCGTGGTGATGTGTTCACTATCCACGTGACTAAGATGATGACTGACGCGGCGACAGAGCGTACCTTTAGCTTTGATGTTAAAGACCACCCTGAGCTTGCTGCGTTGTTCCGCGGTGCTGTACGTTTCGGCTACTGTGCGCAGTCTCAAGCGTCGTCAACTTGGCGTAATATCTTGCGTCCTGATGAAGATGGTAAGAACTTCTACGCGTCTCAGAAGCTGTACCGTGATAATTTCAGTTGGTCTAGCCGTCTGAAAACCATCAGCGGTGTAGTTGCGCCGACCGTGAACGGTGGCGACACCGATACGTACGACGTGCCAATCCCCGTGGAGTACCGAGACATGAACTATCACGCGTGGTACAACATTGACCAGTCTTCGGATTCAGGTGGCGGTATTACAACTATGGCACTATCGCATGAACGTGTTGGTGATGTGATTCGCTTTACTGCGCTGAGTCATAACCGTGGTGGTTTCTACACTGCATTGTTGCGATACAACATTACGTTCTTCAATGACGTGCGAATGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dfffaddec76ae5bbbde7dfafbd583b040f948c3d1be271e61d7bf4a55f59a11c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4798
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Vibrio bacteriophage with anti-biofilm activity Kim,S.G. and Park,S.C. 2019-04-18 — GenBank